Changes

Additional details on [[Rare-Metal#Grouping_from_a_Group_File|groupFile]], [[Rare-Metal#Grouping_from_an_Annotated_VCF_File|annotatedVcf, annotation]] and [[Rare-Metal#Generate_a_VCF_File_to_Annotate_Outside_of_Rare_Metal|writeVcf]] options are available.

Additional details on [[Rare-Metal#Grouping_from_a_Group_File|groupFile]], [[Rare-Metal#Grouping_from_an_Annotated_VCF_File|annotatedVcf, annotation]] and [[Rare-Metal#Generate_a_VCF_File_to_Annotate_Outside_of_Rare_Metal|writeVcf]] options are available.

=== Sample Size Weighted Meta-analysis ===

=== QC Options ===

   WEIGHTLABEL      [LABEL]                    (default = 'N')

   --hwe            [hwe.pvalue.cutoff]                    (default = 1e-05)

   PVALUELABEL     [LABEL]                    (default = 'PVALUE')

   --callRate     [variant.call.rate.cutoff]               (default = 0.95)

  DEFAULTWEIGHT    [NUMBER]                   (default = 1.0)

  MINWEIGHT        [NUMBER]                    (default = 1.0)

=== Inverse Variance Weighted Meta-analysis ===

=== Inverse Variance Weighted Meta-analysis ===