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==== PLOTS====
==== PLOTS====
'''rareMETAL''' generates QQ plots and manhattan plots from single variant meta-analysis by default. Three QQ plots are generated, one with all variants include, one of variants with maf<0.05 and one with variants maf<0.01. All plots are saved in a pdf file named yourPrefix.meta.plots.pdf.
{| border="0"
|-
| align="center" width="100" | [[File:HDL.qq.plot.png]]
|-
| align="center" width="200" | [[File:Singlevar.manhattan.png]]
|}
=== Burden Tests Meta Analysis Output ===
=== Burden Tests Meta Analysis Output ===
