Changes

From Genome Analysis Wiki
Jump to navigationJump to search
4 bytes removed ,  23:52, 8 April 2014
Line 48: Line 48:  
where the burden test statistic under any allele frequency threshold can be constructed from single variant meta-analysis statistics using
 
where the burden test statistic under any allele frequency threshold can be constructed from single variant meta-analysis statistics using
   −
<math>T_{b\left(f_j\right)}=\boldsymbol{\phi}_{f_j}^\mathbf{T}\mathbf{U_{meta}}\bigg/\sqrt{\boldsymbol{\phi}_{f_j}^\mathbf{T}\mathbf{V_{meta}}\boldsymbol{\phi}_{f_j}} </math>is a vector of 0 and 1, indicating if a variant is included in the analysis using frequency threshold <mat>f_i </math>
+
<math>T_{b\left(f_j\right)}=\boldsymbol{\phi}_{f_j}^\mathbf{T}\mathbf{U_{meta}}\bigg/\sqrt{\boldsymbol{\phi}_{f_j}^\mathbf{T}\mathbf{V_{meta}}\boldsymbol{\phi}_{f_j}} </math>
   −
where <math>j</math> represents any allele frequency in a group of rare variants, <math>\boldsymbol{\phi}_{f_j}</math> is a
+
where <math>j</math> represents any allele frequency in a group of rare variants, <math>\boldsymbol{\phi}_{f_j}</math> is a vector of 0 and 1, indicating if a variant is included in the analysis using frequency threshold <mat>f_i </math>
    
===SKAT META ANALYSIS===
 
===SKAT META ANALYSIS===
2,004

edits

Navigation menu