98
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to search→A Simple Tutorial for Using the conditional.rareMETALS.range
res<-conditional.rareMETALS.range(range.name = "LDLR", score.stat.file, cov.file,
res<-conditional.rareMETALS.range(range.name = "LDLR", score.stat.file, cov.file,
c("1:123","1:1234"), c("1:123","1:1234"), test = "GRANVIL", maf.cutoff=0.05,
candidate.variant.vec=c("19:11200282","19:11200309"), known.variant.vec=c("19:11200754","19:11200806","19:11200839"), test = "GRANVIL", maf.cutoff=0.05,
alternative = c("two.sided", "greater", "less"), ix.gold = 1,
alternative = c("two.sided", "greater", "less"), ix.gold = 1,
out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0, max.VT = NULL)
out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0, max.VT = NULL)
print(res$res.out)
