Changes

From Genome Analysis Wiki
Jump to navigationJump to search
19 bytes removed ,  14:44, 13 April 2015
Line 138: Line 138:  
   res<-conditional.rareMETALS.range(range.name = "LDLR", score.stat.file, cov.file,
 
   res<-conditional.rareMETALS.range(range.name = "LDLR", score.stat.file, cov.file,
 
                             candidate.variant.vec=c("19:11200282","19:11200309"), known.variant.vec=c("19:11200754","19:11200806","19:11200839"), test = "GRANVIL", maf.cutoff=0.05,
 
                             candidate.variant.vec=c("19:11200282","19:11200309"), known.variant.vec=c("19:11200754","19:11200806","19:11200839"), test = "GRANVIL", maf.cutoff=0.05,
                             alternative = c("two.sided", "greater", "less"), ix.gold = 1,
+
                             alternative = c("two.sided"), ix.gold = 1,
 
                             out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0, max.VT = NULL)
 
                             out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0, max.VT = NULL)
 
   print(res$res.out)
 
   print(res$res.out)
98

edits

Navigation menu