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, 22:53, 17 November 2010
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| == Read mappers that we like are == | | == Read mappers that we like are == |
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− | [http://bio-bwa.sourceforge.net BWA] - A much faster aligner developed by Richard Durbin and Heng Li. | + | [[Karma]] - Currently under development here in Michigan; trades memory for speed, but is both fast and sensitive (now matches or exceeds both bwa and NovoAlign), and highly effective on nodes with high core counts. |
− | [[Karma]] - Currently under development here in Michigan; a memory hog, but fast and sensitive.
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| + | [http://bio-bwa.sourceforge.net BWA] - A fast aligner developed by Richard Durbin and Heng Li. |
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| [http://www.novocraft.com NovoAlign] - Potentially, a much more sensitive, but slow, aligner. | | [http://www.novocraft.com NovoAlign] - Potentially, a much more sensitive, but slow, aligner. |
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