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SeqShop: Ancestry On Your Own Genome, May 2015 (view source)

Revision as of 14:24, 21 May 2015

5 bytes added ,  14:24, 21 May 2015
→‎Step 2: pileup --> seq
Line 54: Line 54:     
  python $LASER/pileup2seq/pileup2seq.py \
 
  python $LASER/pileup2seq/pileup2seq.py \
−
  -m $SSREF/HGDP_938.site \
+
  -m $SSREF/HGDP/HGDP_938.site \
 
  -o $OUT/ancestry/$SAMPLE.HGDP \
 
  -o $OUT/ancestry/$SAMPLE.HGDP \
 
  $OUT/ancestry/$SAMPLE.HGDP.pileup
 
  $OUT/ancestry/$SAMPLE.HGDP.pileup
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/13404"

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