Difference between revisions of "SeqShop: Estimates of Genetic Ancestry Practical, June 2014"
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See the LASER-tutorial.pdf for an introduction of the LASER analysis workflow, input/output file formats, and usage of the LASER software. | See the LASER-tutorial.pdf for an introduction of the LASER analysis workflow, input/output file formats, and usage of the LASER software. | ||
This page provides step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP). | This page provides step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP). | ||
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Revision as of 23:20, 17 June 2014
Introduction
See the LASER-tutorial.pdf for an introduction of the LASER analysis workflow, input/output file formats, and usage of the LASER software. This page provides step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP).
