SeqShop: Estimates of Genetic Ancestry Practical, June 2014

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Introduction

See the LASER-tutorial.pdf for an introduction of the LASER analysis workflow, input/output file formats, and usage of the LASER software. This page provides step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP).

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