Difference between revisions of "SeqShop: Friday - Practicing what we learned, June 2014"
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What's involved in the alignment pipeline? | What's involved in the alignment pipeline? | ||
* [[File:AlignmentPipeline.jpg|1200px]] | * [[File:AlignmentPipeline.jpg|1200px]] | ||
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What's involved in the snpcall pipeline? | What's involved in the snpcall pipeline? | ||
Revision as of 08:58, 20 June 2014
SeqShop: Calling Your Own Genome
Extracting regions from a BAM using a bed file.
- bamUtil writeRegion
- (next week - minor bug until I release)
What's involved in the alignment pipeline?
What's involved in the snpcall pipeline?
- Clip Overlap
