Difference between revisions of "SeqShop: Friday - Practicing what we learned, June 2014"
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[[SeqShop: Calling Your Own Genome]] | [[SeqShop: Calling Your Own Genome]] | ||
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| + | Extracting regions from a BAM using a bed file. | ||
| + | * bamUtil writeRegion | ||
| + | ** (next week - minor bug until I release) | ||
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| + | |||
| + | What's involved in the alignment pipeline? | ||
| + | * [[File:AlignmentPipeline.jpg|1200px]] | ||
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| + | |||
| + | What's involved in the snpcall pipeline? | ||
| + | * [[File:SnpcallPipeline.jpg|1200px]] | ||
| + | ** Clip Overlap | ||
| + | |||
[[SeqShop: Ancestry On Your Own Genome]] | [[SeqShop: Ancestry On Your Own Genome]] | ||
Revision as of 08:55, 20 June 2014
SeqShop: Calling Your Own Genome
Extracting regions from a BAM using a bed file.
- bamUtil writeRegion
- (next week - minor bug until I release)
What's involved in the alignment pipeline?
What's involved in the snpcall pipeline?
- Clip Overlap
