Difference between revisions of "SeqShop: May 2015"

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| [[Media:DecWorshop2014-ancestry.pdf|Estimates of Genetic Ancestry]]
 
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|[[SeqShop: Estimates of Genetic Ancestry Practical, May 2015| SeqShop: Estimates of Genetic Ancestry Practical]]
 
|[[SeqShop: Estimates of Genetic Ancestry Practical, May 2015| SeqShop: Estimates of Genetic Ancestry Practical]]
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| [[Media:2014.12_-_Workshop_Closing.pdf|Example of a Whole Genome Association Study]]
 
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|[[SeqShop: Genetic Association Analysis Practical, December 2014|SeqShop: Genetic Association Analysis Practical]]
 
 
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Revision as of 15:57, 15 May 2015

Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/

Course Agenda: http://seqshop.sph.umich.edu/index.php/course-agenda


Monday Lecture Practical Own Genome Analysis
Brief Introduction and Background SeqShop: Quick intro to Linux SeqShop: Aligning Your Own Genome
Design of Human Genetic Studies SeqShop: Sequence Mapping and Assembly Practical
Sequence Mapping and Assembly iobio: Visualizing BAM statistics
Tuesday Lecture Practical Own Genome Analysis
Variant Calling and Filtering for SNPs SeqShop: Variant Calling and Filtering for SNPs Practical SeqShop: Calling Your Own Genome
Analysis of Structural Variation - Part 1

Analysis of Structural Variation - Part 2

SeqShop: Analysis of Structural Variation Practical
Wednesday Lecture Practical Own Genome Analysis
Variant Calling and Filtering for INDELs SeqShop: Variant Calling and Filtering for INDELs Practical SeqShop: Calling Your Own Genome
Thursday Lecture Practical Own Genome Analysis
Estimates of Genetic Ancestry SeqShop: Estimates of Genetic Ancestry Practical
Genetic Association Analysis SeqShop: Association Analysis
Friday Lecture Practical Own Genome Analysis
Example of a Whole Genome Association Study SeqShop: Ancestry On Your Own Genome