Difference between revisions of "SeqShop: May 2015"

Revision as of 16:06, 15 May 2015

Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/

Monday	Lecture	Practical	Own Genome Analysis
	Brief Introduction and Background	SeqShop: Quick intro to Linux	SeqShop: Aligning Your Own Genome
	Design of Human Genetic Studies	SeqShop: Sequence Mapping and Assembly Practical
	Sequence Mapping and Assembly	iobio: Visualizing BAM statistics
Tuesday	Lecture	Practical	Own Genome Analysis
	Variant Calling and Filtering for SNPs	SeqShop: Variant Calling and Filtering for SNPs Practical	SeqShop: Calling Your Own Genome
	Analysis of Structural Variation - Part 1 Analysis of Structural Variation - Part 2	SeqShop: Analysis of Structural Variation Practical	SeqShop: Calling Your Own Genome
Wednesday	Lecture	Practical	Own Genome Analysis
	Variant Calling and Filtering for INDELs	SeqShop: Variant Calling and Filtering for INDELs Practical	SeqShop: Calling Your Own Genome
Thursday	Lecture	Practical	Own Genome Analysis
	Estimates of Genetic Ancestry	SeqShop: Estimates of Genetic Ancestry Practical		Genetic Association Analysis	SeqShop: Association Analysis
Friday	Lecture	Practical	Own Genome Analysis
	Example of a Whole Genome Association Study		SeqShop: Ancestry On Your Own Genome

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 | [[Media:DecWorshop2014-ancestry.pdf|Estimates of Genetic Ancestry]]
 |[[SeqShop: Estimates of Genetic Ancestry Practical, May 2015| SeqShop: Estimates of Genetic Ancestry Practical]]
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 | [[Media:Seqshop genetic association analysis 141211.pdf|Genetic Association Analysis]]
 |[[SeqShop: Association Analysis, May 2015| SeqShop: Association Analysis]]