Difference between revisions of "SeqShop: May 2015"
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Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/ | Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/ | ||
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| + | Workshop Schedule: [[Media:SeqShopScheduleDec2014.pdf|SeqShopScheduleDec2014.pdf]] | ||
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| + | {| class="wikitable" cellpadding=5 | ||
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| + | ! style="background:#ABE" | Monday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical !! style="background:#ABE" | ''Own Genome Analysis'' | ||
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| + | | [[Media:2014.12_-_Workshop_Introduction.pdf|Brief Introduction and Background]] | ||
| + | | [[Media:Dec2014 SeqShop - Linux.pdf|SeqShop: Practical Intro]] | ||
| + | |rowspan="3" | ''[[SeqShop: Aligning Your Own Genome, December 2014|SeqShop: Aligning Your Own Genome]]'' | ||
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| + | | [[Media:Sequencing symposium 2014.pptx|Design of Human Genetic Studies]] | ||
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| + | | [[Media:Mapping and assemblyDec2014.pdf|Sequence Mapping and Assembly]] | ||
| + | | [[SeqShop: Sequence Mapping and Assembly Practical, December 2014|SeqShop: Sequence Mapping and Assembly Practical]] | ||
| + | [http://iobio.io Live experimentation with IOBIO] | ||
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| + | ! style="background:#ABE" | Tuesday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical !! style="background:#ABE" | ''Own Genome Analysis'' | ||
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| + | | [[Media:seqshop_dec14_day2_snp_lecture_v2.pdf|Variant Calling and Filtering for SNPs]] | ||
| + | | [[SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014|SeqShop: Variant Calling and Filtering for SNPs Practical]] | ||
| + | | rowspan="2"|''[[SeqShop: Calling Your Own Genome, December 2014|SeqShop: Calling Your Own Genome]]'' | ||
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| + | | [[Media:Variant Calling and Filtering for INDELs.pdf|Variant Calling and Filtering for INDELs]] | ||
| + | | [[SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014|SeqShop: Variant Calling and Filtering for INDELs Practical]] | ||
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| + | ! style="background:#ABE" | Wednesday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical !! style="background:#ABE" | ''Own Genome Analysis'' | ||
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| + | | [[Media:Dec2014 Analysis of SV.pdf|Analysis of Structural Variation - Part 1]] | ||
| + | [[Media:Dec2014 Analysis of SV part 2.pdf|Analysis of Structural Variation - Part 2]] | ||
| + | | [[SeqShop: Analysis of Structural Variation Practical, December 2014|SeqShop: Analysis of Structural Variation Practical]] | ||
| + | |''[[SeqShop: Calling Your Own Genome, December 2014|SeqShop: Calling Your Own Genome]]'' | ||
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| + | ! style="background:#ABE" | Thursday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical !! style="background:#ABE" | ''Own Genome Analysis'' | ||
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| + | | [[Media:DecWorshop2014-ancestry.pdf|Estimates of Genetic Ancestry]] | ||
| + | |[[SeqShop: Estimates of Genetic Ancestry Practical, December 2014| SeqShop: Estimates of Genetic Ancestry Practical]] | ||
| + | | rowspan="2"|''[[SeqShop: Calling Your Own Genome, December 2014|SeqShop: Calling Your Own Genome]]'' | ||
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| + | | [[Media:Seqshop genetic association analysis 141211.pdf|Genetic Association Analysis]] | ||
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| + | ! style="background:#ABE" | Friday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical !! style="background:#ABE" | ''Own Genome Analysis'' | ||
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| + | |[[SeqShop: Genetic Association Analysis Practical, December 2014|SeqShop: Genetic Association Analysis Practical]] | ||
| + | |rowspan="2"|''[[SeqShop: Ancestry On Your Own Genome, December 2014|SeqShop: Ancestry On Your Own Genome]]'' | ||
| + | ''[[SeqShop: Calling Your Own Genome, December 2014|SeqShop: Calling Your Own Genome]]'' | ||
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| + | | [[Media:2014.12_-_Workshop_Closing.pdf|Example of a Whole Genome Association Study]] | ||
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| + | |} | ||
Revision as of 20:42, 3 May 2015
Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/
Workshop Schedule: SeqShopScheduleDec2014.pdf
