Difference between revisions of "SeqShop: May 2015"

Revision as of 22:30, 18 May 2015

Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/

Monday	Lecture	Practical	Own Genome Analysis
	Brief Introduction and Background	SeqShop: Quick intro to Linux	SeqShop: Aligning Your Own Genome
	Design of Human Genetic Studies	SeqShop: Sequence Mapping and Assembly Practical
	Sequence Mapping and Assembly	iobio: Visualizing BAM statistics
Tuesday	Lecture	Practical	Own Genome Analysis
	Variant Calling and Filtering for SNPs	SeqShop: Variant Calling and Filtering for SNPs Practical	SeqShop: Calling Your Own Genome
	Analysis of Structural Variation - Part 1 Analysis of Structural Variation - Part 2	SeqShop: Analysis of Structural Variation Practical	SeqShop: Calling Your Own Genome
Wednesday	Lecture	Practical	Own Genome Analysis
	Variant Calling and Filtering for INDELs	SeqShop: Variant Calling and Filtering for INDELs Practical	SeqShop: Calling Your Own Genome
Thursday	Lecture	Practical	Own Genome Analysis
	Estimates of Genetic Ancestry	SeqShop: Estimates of Genetic Ancestry Practical
	Genetic Association Analysis	SeqShop: Association Analysis
Friday	Lecture	Practical	Own Genome Analysis
	Summary		SeqShop: Ancestry On Your Own Genome

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-| [[Media:seqshop_dec14_day2_snp_lecture_v2.pdf|Variant Calling and Filtering for SNPs]]
+| [[Media:seqshop_may_2015_day2_snp_lecture_v2.pdf|Variant Calling and Filtering for SNPs]]
 | [[SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015|SeqShop: Variant Calling and Filtering for SNPs Practical]]
 | rowspan="2"|''[[SeqShop: Calling Your Own Genome, May 2015|SeqShop: Calling Your Own Genome]]''