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Revision as of 11:22, 8 December 2014
, 11:22, 8 December 2014→Records
HWEGF=0.96,0.04,0.00 : genotype frequency derived from HWEAF
HWEGF=0.96,0.04,0.00 : genotype frequency derived from HWEAF
HWE_LPVAL=-0.18 : log p value of HWE test
HWE_LPVAL=-0.18 : log p value of HWE test
FIC=-0.003 : genotype likelihood based inbreeding coefficient
FIC=-0.003 : genotype likelihood based inbreeding coefficient, ranges -1 to 1. <0 denotes excess of heterozygotes and >0 means excess of homozygotes assuming HWE.
AB=0.38 : genotype likelihood based allele balance
AB=0.38 : genotype likelihood based allele balance, ranges 0 to 1 with 0.5 for balance, >0.5 meaning reference bias and <0.5 denoting alternate allele bias.
=====GENOTYPE field=====
=====GENOTYPE field=====
