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=== Filtering Summary Statistics ===
 
=== Filtering Summary Statistics ===
   −
  cat ${OUTPUT}/vcfs/chr22/chr22.filtered.sites.vcf.summary
+
  cat ${OUT}/vcfs/chr22/chr22.filtered.sites.vcf.summary
    
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== GotCloud Genotype Refinement ==
 
== GotCloud Genotype Refinement ==
    
  seqshop/gotcloud/gotcloud beagle --conf seqshop/inputs/gotcloud.conf --numjobs 2 --region 22:36000000-37000000
 
  seqshop/gotcloud/gotcloud beagle --conf seqshop/inputs/gotcloud.conf --numjobs 2 --region 22:36000000-37000000

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