3,045
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to searchSeqShop: Variant Calling and Filtering for SNPs Practical, June 2014 (view source)
Revision as of 12:54, 15 June 2014
, 12:54, 15 June 2014→Filtered VCF
Now, let's look at the filtered file with genotypes.
Now, let's look at the filtered file with genotypes.
zless -S ${OUT}/vcfs/chr22/chr22.filtered.vcf.gz
* Scroll down until you find some variants.
* Scroll down until you find some variants.
</div>
</div>
</div>
</div>
=== Passing SNPs ===
=== Passing SNPs ===
