SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014

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seqshop/gotcloud/gotcloud snpcall --conf seqshop/inputs/gotcloud.conf --numjobs 4 --region 22:36000000-37000000
seqshop/gotcloud/gotcloud beagle --conf seqshop/inputs/gotcloud.conf --numjobs 2 --region 22:36000000-37000000