User contributions
From Genome Analysis Wiki
Jump to navigationJump to search- 18:57, 25 February 2016 diff hist +501 Tandem Repeat Concepts →Shifting
- 18:48, 25 February 2016 diff hist +663 Tandem Repeat Concepts →Acyclicity
- 15:13, 14 February 2016 diff hist +737 Vt →Profile VNTRs
- 14:53, 14 February 2016 diff hist +479 Vt →Profile VNTRs
- 14:40, 14 February 2016 diff hist +2 Vt →Profile VNTRs
- 14:38, 14 February 2016 diff hist -189 Vt →Profile VNTRs
- 14:38, 14 February 2016 diff hist -8 Vt →Profile VNTRs
- 14:35, 14 February 2016 diff hist +57 Vt →Profile VNTRs
- 14:23, 14 February 2016 diff hist +2,767 Vt →Profile Indels
- 20:35, 12 February 2016 diff hist +202 Tandem Repeat Concepts →Classification
- 20:32, 12 February 2016 diff hist +221 Tandem Repeat Concepts →Algorithm for Detection
- 17:25, 10 February 2016 diff hist +172 Vt →Normalization
- 17:10, 10 February 2016 diff hist +96 Vt →Filters
- 21:43, 8 February 2016 diff hist 0 Vt →Decompose biallelic block substitutions
- 14:30, 8 February 2016 diff hist +53 Vt →Decompose biallelic block substitutions
- 14:27, 8 February 2016 diff hist +775 Vt →Decompose biallelic block substitutions
- 13:39, 6 February 2016 diff hist +1 Tandem Repeat Concepts →Implementation
- 13:39, 6 February 2016 diff hist +61 Tandem Repeat Concepts →Classification
- 13:38, 6 February 2016 diff hist +357 N Tandem Repeat Concepts Created page with "= Introduction = This page is about Tandem Repeats. = Definition = A series of repeats that are contiguous = Classification = == Algorithm for Detection == = Implement..."
- 11:53, 29 January 2016 diff hist +244 Variant classification →Interesting Variant Types
- 11:48, 29 January 2016 diff hist +259 Variant classification →Interesting Variant Types
- 11:44, 29 January 2016 diff hist -238 Variant classification →Interesting Variant Types
- 11:42, 29 January 2016 diff hist +312 Variant classification →Interesting Variant Types
- 11:40, 29 January 2016 diff hist -2 Variant classification →Interesting Variant Types
- 11:40, 29 January 2016 diff hist +198 Variant classification →Structured Variants Examples
- 18:08, 23 January 2016 diff hist -2 Vt →BCF Compression Levels vs Compression Time
- 18:05, 23 January 2016 diff hist +181 Vt →BCF Compression Levels vs Compression Time
- 01:20, 23 January 2016 diff hist +1 Vt →BCF Compression Levels vs Compression Time
- 19:26, 22 January 2016 diff hist +4 Vt →BCF Compression Levels vs Compression Time
- 14:54, 22 January 2016 diff hist -4 Vt →BCF Compression Levels vs Compression Time
- 14:11, 22 January 2016 diff hist +22 Vt →BCF Compression Levels vs Compression Time
- 12:10, 21 January 2016 diff hist +1,371 Vt →Resource Bundle
- 13:24, 20 January 2016 diff hist -1 Vt →View
- 13:23, 20 January 2016 diff hist +6 Vt →BCF Compression Levels vs Compression Time
- 13:22, 20 January 2016 diff hist +52 Vt →BCF Compression Levels vs Compression Time
- 13:21, 20 January 2016 diff hist +13 Vt →BCF Compression Levels vs Compression Time
- 12:33, 20 January 2016 diff hist +7 Vt →BCF Compression vs Compression Time
- 12:33, 20 January 2016 diff hist +36 Vt →BCF Compression vs Compression Time
- 12:32, 20 January 2016 diff hist +133 Vt →BCF Compression vs Compression Time
- 12:31, 20 January 2016 diff hist +133 Vt →BCF Compression vs Compression Time
- 12:28, 20 January 2016 diff hist +623 Vt →General cases of Ploidy and Alleles
- 12:15, 20 January 2016 diff hist +10 Vt →General Features
- 15:28, 16 January 2016 diff hist +5 Vt →How to cite vt?
- 15:28, 16 January 2016 diff hist +242 Vt →FAQ
- 13:31, 15 January 2016 diff hist -97 Vt →Installation
- 13:31, 15 January 2016 diff hist -85 Vt →Introduction
- 16:28, 10 January 2016 diff hist +915 Vt →View
- 14:20, 4 January 2016 diff hist +806 Vt →View
- 16:51, 4 December 2015 diff hist -150 Vt →Remove overlap
- 16:50, 4 December 2015 diff hist -66 Vt →Remove overlap
- 16:50, 4 December 2015 diff hist -10,789 Vt →Annotate Indels
- 16:48, 4 December 2015 diff hist +11,534 Vt →Annotate Indels
- 15:53, 25 November 2015 diff hist -21 Vt →Discover2
- 15:52, 25 November 2015 diff hist -948 Vt →Discover
- 12:10, 2 November 2015 diff hist +3 Vt →Concatenate
- 12:08, 2 November 2015 diff hist +358 Vt →Concatenate
- 12:05, 2 November 2015 diff hist +154 Vt →Concatenate
- 21:23, 12 October 2015 diff hist +91 Variant classification →Complex Multiallelic Examples
- 21:22, 12 October 2015 diff hist +636 Variant classification →Complex Biallelic Examples
- 21:18, 12 October 2015 diff hist +390 Variant classification →Simple Biallelic Examples
- 21:14, 12 October 2015 diff hist -22 Variant classification →Weird Examples
- 21:14, 12 October 2015 diff hist +34 Variant classification →Complex Multiallelic Examples
- 21:13, 12 October 2015 diff hist +15 Variant classification →Complex Biallelic Examples
- 21:13, 12 October 2015 diff hist -72 Variant classification →Simple Biallelic Examples
- 21:12, 12 October 2015 diff hist -4 Variant classification →Classification Procedure
- 07:49, 6 October 2015 diff hist +62 Vt →Annotate Indels
- 19:45, 5 October 2015 diff hist -150 Vt →Annotate Indels
- 19:39, 5 October 2015 diff hist +224 Vt →Annotate Indels
- 17:27, 5 October 2015 diff hist -4 Vt →Annotate Indels
- 17:13, 5 October 2015 diff hist -73 Vt →Annotate Indels
- 17:11, 5 October 2015 diff hist -1,313 Vt →Annotate Indels
- 17:00, 5 October 2015 diff hist +6,441 Vt →Annotate Indels
- 16:52, 5 October 2015 diff hist +77 Vt →Annotate Indels
- 16:51, 5 October 2015 diff hist -1 Vt →Annotate Indels
- 16:50, 5 October 2015 diff hist +3,533 Vt →Annotate Indels
- 16:48, 5 October 2015 diff hist +74 Vt →Annotate Indels
- 16:47, 5 October 2015 diff hist +2,661 Vt →Merge candidate variants
- 16:46, 30 September 2015 diff hist 0 Variant classification →Complex Biallelic Examples
- 16:45, 30 September 2015 diff hist 0 Variant classification →Simple Biallelic Examples
- 21:35, 21 September 2015 diff hist -4 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 21:35, 21 September 2015 diff hist +316 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 17:53, 10 September 2015 diff hist +88 Vt →Alternate headers
- 12:38, 3 September 2015 diff hist -82 Vt →Profile SNPs
- 12:35, 3 September 2015 diff hist -188 Vt →Profile SNPs
- 12:30, 3 September 2015 diff hist +2,778 Vt →Profile Indels
- 15:34, 24 August 2015 diff hist +133 Vt →Partition
- 12:27, 19 August 2015 diff hist +5 Vt →Discover2
- 12:11, 19 August 2015 diff hist +650 Vt →Discover2
- 11:52, 19 August 2015 diff hist +956 Vt →Discover
- 16:02, 18 August 2015 diff hist +57 Vt →Annotate Regions
- 16:00, 18 August 2015 diff hist -68 Vt →Annotate Regions
- 23:23, 5 August 2015 diff hist -8 Vt →Uncompressed BCF streams
- 16:38, 3 August 2015 diff hist +204 Vt →Alternate headers
- 15:54, 3 August 2015 diff hist +99 Genotype Likelihood based Allele Frequency →Derivation current
- 15:53, 3 August 2015 diff hist -99 Genotype Likelihood based Allele Frequency →Implementation
- 15:53, 3 August 2015 diff hist +99 Genotype Likelihood based Inbreeding Coefficient →Derivation current
- 15:52, 3 August 2015 diff hist +99 Genotype Likelihood based Hardy-Weinberg Test →Derivation current
- 15:52, 3 August 2015 diff hist +99 Genotype Likelihood based Allele Frequency →Used in
- 15:19, 3 August 2015 diff hist +45 Vt →Paste
- 10:36, 28 July 2015 diff hist +227 Genotype Likelihood based Allele Frequency →Estimation of Genotype Frequencies without assuming HWE
- 17:26, 22 July 2015 diff hist -8 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:26, 22 July 2015 diff hist +78 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:24, 22 July 2015 diff hist 0 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:24, 22 July 2015 diff hist +24 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:22, 22 July 2015 diff hist +110 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:21, 22 July 2015 diff hist +9 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:21, 22 July 2015 diff hist -81 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:20, 22 July 2015 diff hist -2 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:20, 22 July 2015 diff hist +8 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:19, 22 July 2015 diff hist -29 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 17:18, 22 July 2015 diff hist +84 Relationship between Ploidy, Alleles and Genotypes →Observation of nested patterns
- 17:15, 22 July 2015 diff hist +7 Relationship between Ploidy, Alleles and Genotypes →Simple cases
- 17:14, 22 July 2015 diff hist +1 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 17:14, 22 July 2015 diff hist +9 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 17:13, 22 July 2015 diff hist -7 Relationship between Ploidy, Alleles and Genotypes →Motivation
- 17:12, 22 July 2015 diff hist +5 Relationship between Ploidy, Alleles and Genotypes →Introduction
- 17:11, 22 July 2015 diff hist -1 Relationship between Ploidy, Alleles and Genotypes →Introduction
- 16:43, 15 July 2015 diff hist +10 Vt →Rminfo
- 16:41, 15 July 2015 diff hist +581 Vt →Validate
- 08:48, 14 July 2015 diff hist +35 Vt →Alternate headers
- 15:10, 2 July 2015 diff hist +34 Variant Normalization →Here is an example where this normalization algorithm fails
- 15:09, 2 July 2015 diff hist -28 Variant Normalization →Citation
- 15:09, 2 July 2015 diff hist -28 Vt →Normalization
- 14:13, 2 July 2015 diff hist -3 Vt →Filters
- 14:12, 2 July 2015 diff hist -1 Vt →Index
- 14:11, 2 July 2015 diff hist +53 Vt →Index
- 13:41, 2 July 2015 diff hist +319 Vt →Normalization
- 12:35, 22 June 2015 diff hist +2,297 Variant Normalization →Citation
- 12:35, 22 June 2015 diff hist -2,297 Variant Normalization →Here is an example where this normalization algorithm fails
- 09:59, 22 June 2015 diff hist -150 Vt →Filters
- 09:58, 22 June 2015 diff hist +369 Vt →Filters
- 09:39, 22 June 2015 diff hist -54 Vt →Filters
- 09:38, 22 June 2015 diff hist +75 Vt →Filters
- 22:06, 21 June 2015 diff hist +117 Vt →Filters
- 21:37, 21 June 2015 diff hist +119 Vt →Filters
- 11:43, 20 June 2015 diff hist 0 Make file tutorial →Similar artilces
- 11:35, 20 June 2015 diff hist +5 Make file tutorial →Similar artilces
- 11:35, 20 June 2015 diff hist +91 Make file tutorial →Similar artilces
- 11:34, 20 June 2015 diff hist +448 Make file tutorial →Similar artilces
- 11:13, 20 June 2015 diff hist +16 Make file tutorial →Similar artilces
- 11:12, 20 June 2015 diff hist +56 Make file tutorial →Generated Makefile
- 10:57, 20 June 2015 diff hist +16,552 Make file tutorial →Generated Makefile
- 10:56, 20 June 2015 diff hist +20,537 Make file tutorial →Script
- 10:29, 17 June 2015 diff hist +11 Vt →Filters
- 09:48, 17 June 2015 diff hist +324 Vt →Filters
- 15:54, 15 June 2015 diff hist +90 Make file tutorial →Introduction
- 14:41, 15 June 2015 diff hist 0 Make file tutorial →Introduction
- 14:41, 15 June 2015 diff hist +168 Make file tutorial →Introduction
- 14:40, 15 June 2015 diff hist +38 Make file tutorial →Introduction
- 14:39, 15 June 2015 diff hist -39 Make file tutorial →Introduction
- 16:33, 12 June 2015 diff hist -230 Make file tutorial →Solution
- 16:32, 12 June 2015 diff hist +340 Make file tutorial →Basic Idea
- 16:25, 12 June 2015 diff hist +473 Make file tutorial →Basic Idea
- 16:21, 12 June 2015 diff hist +524 Make file tutorial →Basic Idea
- 16:08, 12 June 2015 diff hist +194 Make file tutorial →Introduction
- 15:33, 12 June 2015 diff hist +2 Make file tutorial →Introduction
- 15:32, 12 June 2015 diff hist 0 Make file tutorial →Introduction
- 15:31, 12 June 2015 diff hist -5 Make file tutorial →Introduction
- 14:24, 12 June 2015 diff hist +149 Make file tutorial →Introduction
- 14:21, 12 June 2015 diff hist -25 Make file tutorial →Example
- 14:21, 12 June 2015 diff hist +207 Make file tutorial →Example
- 14:19, 12 June 2015 diff hist +100 Make file tutorial →Example
- 14:19, 12 June 2015 diff hist +428 Make file tutorial →Script
- 13:38, 12 June 2015 diff hist 0 Make file tutorial →Introduction
- 13:38, 12 June 2015 diff hist +3 Make file tutorial →Script
- 13:32, 12 June 2015 diff hist -1 Make file tutorial →Example
- 12:00, 12 June 2015 diff hist +1 Make file tutorial →Introduction
- 11:58, 12 June 2015 diff hist +3,422 Make file tutorial →Introduction
- 10:31, 12 June 2015 diff hist +1,262 N Make file tutorial Created page with "= Introduction = GNU Makefile is a widely used tool for managing the complicated process of compiling a C program. But this is not the only use for this very powerful tool. ..."
- 16:25, 8 June 2015 diff hist -1 Vt →Alternate headers
- 16:23, 8 June 2015 diff hist -1 Vt →Alternate headers
- 16:23, 8 June 2015 diff hist -81 Vt →Alternate headers
- 13:46, 28 May 2015 diff hist -3 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 12:51, 27 May 2015 diff hist -1 Vt →Updating
- 12:17, 27 May 2015 diff hist -4 Vt →FAQ
- 12:17, 27 May 2015 diff hist -2 Vt →Resource Bundle
- 12:17, 27 May 2015 diff hist +451 Vt →Resource Bundle
- 12:16, 27 May 2015 diff hist -455 Vt →FAQ
- 12:16, 27 May 2015 diff hist 0 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 12:15, 27 May 2015 diff hist -1 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 12:11, 27 May 2015 diff hist -22 Vt →1. Reference Sequence
- 12:10, 27 May 2015 diff hist -3 Vt →Reference Sequence
- 12:09, 27 May 2015 diff hist +20 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 12:09, 27 May 2015 diff hist -2,190 Vt →1. vt cannot retrieve sequences from my reference sequence file
- 12:08, 27 May 2015 diff hist +10 Vt →FAQ
- 12:07, 27 May 2015 diff hist +2,190 Vt →FAQ
- 12:07, 27 May 2015 diff hist -1 Vt →FAQ
- 12:06, 27 May 2015 diff hist +12 Vt →FAQ
- 12:03, 27 May 2015 diff hist +313 Vt →FAQ
- 12:01, 27 May 2015 diff hist +127 Vt →Genotype
- 11:30, 27 May 2015 diff hist +4 Vt →Drop duplicate variants
- 11:21, 27 May 2015 diff hist +6 Vt →Installation
- 11:15, 27 May 2015 diff hist -6 Vt →Installation
- 11:15, 27 May 2015 diff hist -4 Vt →Installation
- 11:15, 27 May 2015 diff hist +13 Vt →Installation
- 11:13, 27 May 2015 diff hist +140 Vt →Installation
- 13:28, 21 May 2015 diff hist -1 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 08:05, 20 May 2015 diff hist -4 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 08:05, 20 May 2015 diff hist +199 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 12:45, 19 May 2015 diff hist 0 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 10:08, 19 May 2015 diff hist +360 Relationship between Ploidy, Alleles and Genotypes →Getting the index of a genotype in an enumerated list given a ploidy and alleles
- 10:05, 19 May 2015 diff hist -64 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 10:03, 19 May 2015 diff hist +2 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 10:03, 19 May 2015 diff hist +61 Relationship between Ploidy, Alleles and Genotypes →Derivation
- 10:03, 19 May 2015 diff hist +2 Relationship between Ploidy, Alleles and Genotypes →The number of genotypes given a ploidy and alleles
- 10:02, 19 May 2015 diff hist -2 Relationship between Ploidy, Alleles and Genotypes →The number of genotypes given a ploidy and alleles
- 10:02, 19 May 2015 diff hist +56 Relationship between Ploidy, Alleles and Genotypes →Derivation for counting the number of genotypes
- 11:06, 15 May 2015 diff hist +147 Vt →Alternate headers
- 11:02, 15 May 2015 diff hist +202 Vt →Alternate headers
- 13:42, 14 May 2015 diff hist -169 Vt →Profile Indels
- 13:37, 14 May 2015 diff hist -94 Vt →Paste
- 13:35, 14 May 2015 diff hist +36 Vt →Decompose
- 13:33, 14 May 2015 diff hist +96 Vt →Decompose
- 13:25, 14 May 2015 diff hist +17 Vt →Decompose
- 11:50, 14 May 2015 diff hist +24 Vt →Decompose
- 11:46, 14 May 2015 diff hist -4 Vt →Decompose biallelic block substitutions
- 11:42, 14 May 2015 diff hist +159 Vt →Estimate
- 11:39, 14 May 2015 diff hist 0 Vt →Validate
- 11:37, 14 May 2015 diff hist +321 Vt →Decompose
- 11:33, 14 May 2015 diff hist +239 Vt →Drop duplicate variants
- 11:31, 14 May 2015 diff hist +1,052 Vt →Decompose biallelic block substitutions
- 11:24, 14 May 2015 diff hist +434 Vt →Decompose
- 11:16, 14 May 2015 diff hist +109 Vt →Decompose
- 11:13, 14 May 2015 diff hist +1,403 Vt →Decompose
- 11:09, 14 May 2015 diff hist +54 Vt →Decompose
- 08:17, 14 May 2015 diff hist +47 Vt →Partition
- 08:14, 14 May 2015 diff hist -6 Vt →Partition
- 08:13, 14 May 2015 diff hist +14 Vt →Multi Partition
- 08:13, 14 May 2015 diff hist -1 Vt →Multi Partition
- 08:12, 14 May 2015 diff hist +1 Vt →Multi Partition
- 08:12, 14 May 2015 diff hist +146 Vt →Multi Partition
- 08:11, 14 May 2015 diff hist -4 Vt →Multi Partition
- 08:10, 14 May 2015 diff hist +161 Vt →Multi Partition
- 15:39, 12 May 2015 diff hist +59 Vt →Decompose biallelic block substitutions
- 22:04, 7 May 2015 diff hist -574 Vt →Compute Features
- 22:01, 7 May 2015 diff hist +8 Vt →Estimate
- 22:00, 7 May 2015 diff hist +2,466 Vt →Compute Features
- 08:16, 7 May 2015 diff hist -36 Variant Normalization →Citation
- 08:16, 7 May 2015 diff hist -43 Variant Normalization →Citation
- 08:16, 7 May 2015 diff hist -43 Vt →Normalization
- 11:15, 6 May 2015 diff hist +8 Vt →Multi Partition
- 11:14, 6 May 2015 diff hist -365 Vt →Partition
- 11:11, 6 May 2015 diff hist +1,333 Vt →Partition
- 14:40, 28 April 2015 diff hist +90 Relationship between Ploidy, Alleles and Genotypes →Maintained by
- 09:59, 2 April 2015 diff hist -270 Vt →Annotate Variants
- 09:55, 2 April 2015 diff hist +1,099 Vt →Annotate Variants
- 17:25, 28 March 2015 diff hist -65 Variant Normalization →Here is an example where this normalization algorithm fails
- 17:15, 28 March 2015 diff hist +700 Variant Normalization →Here is an example where this normalization algorithm fails
- 23:48, 26 March 2015 diff hist 0 Variant Normalization →Here is an example where this normalization algorithm fails
- 23:46, 26 March 2015 diff hist -51 Variant Normalization →I can find an example where the normalization algorithm fails