User contributions
From Genome Analysis Wiki
Jump to navigationJump to search- 00:01, 28 March 2013 diff hist 0 N File:Triodenovo.gz current
- 00:00, 28 March 2013 diff hist -4 Triodenovo
- 23:59, 27 March 2013 diff hist +85 Triodenovo
- 14:30, 25 March 2013 diff hist 0 File:Triodenovo.tar.gz uploaded a new version of "File:Triodenovo.tar.gz"
- 13:41, 25 March 2013 diff hist 0 N File:Triodenovo.tar.gz
- 13:40, 25 March 2013 diff hist +45 N Triodenovo Created page with ' download here.'
- 12:42, 17 March 2013 diff hist 0 N File:Polymutt precompiled.tar.gz current
- 12:42, 17 March 2013 diff hist +85 Polymutt beta current
- 11:33, 14 March 2013 diff hist 0 N File:Polymutt.0.14.tar.gz current
- 11:31, 14 March 2013 diff hist +49 N Polymutt beta Created page with ' downloaded here.'
- 18:08, 28 February 2013 diff hist +3 BamPileup current
- 18:08, 28 February 2013 diff hist +40 BamPileup
- 18:07, 28 February 2013 diff hist 0 N File:BamPileup.tar.gz current
- 18:06, 28 February 2013 diff hist -4 BamPileup →Download
- 18:05, 28 February 2013 diff hist +30 BamPileup →Download
- 18:01, 28 February 2013 diff hist +432 N BamPileup Created page with '==Simple pileup tool to check the reads covering specific regions/sites ==Download== The following parameters are available. Ones with "[]" are in effect: Input Files : --b…'
- 11:36, 16 January 2013 diff hist +227 Polymutt
- 16:52, 13 January 2013 diff hist +82 Polymutt →Updates
- 16:52, 13 January 2013 diff hist +41 Polymutt →Updates
- 16:51, 13 January 2013 diff hist -2 Polymutt →Updates
- 16:50, 13 January 2013 diff hist +170 Polymutt →Updates
- 16:42, 13 January 2013 diff hist 0 N File:Polymutt.0.13.binary.tar.gz current
- 16:42, 13 January 2013 diff hist 0 Polymutt →Download
- 16:31, 13 January 2013 diff hist 0 N File:Polymutt.0.13.tar.gz current
- 16:29, 13 January 2013 diff hist 0 Polymutt →Download
- 16:28, 13 January 2013 diff hist +131 Polymutt →Updates
- 16:26, 13 January 2013 diff hist 0 Polymutt →Updates
- 03:21, 25 October 2012 diff hist +21 Polymutt →Additional Notes
- 03:20, 25 October 2012 diff hist +4 Polymutt →Additional Notes
- 03:19, 25 October 2012 diff hist +354 Polymutt →Additional Notes
- 03:12, 25 October 2012 diff hist -10 Polymutt →Additional Notes
- 14:05, 17 October 2012 diff hist -2 Polymutt →Additional Notes
- 14:04, 17 October 2012 diff hist +1 Polymutt →Additional Notes
- 14:03, 17 October 2012 diff hist 0 Polymutt →Additional Notes
- 14:02, 17 October 2012 diff hist +79 Polymutt →Additional Notes
- 14:01, 17 October 2012 diff hist -2 Polymutt →Additional Notes
- 14:01, 17 October 2012 diff hist +6 Polymutt →Additional Notes
- 14:00, 17 October 2012 diff hist +259 Polymutt →Additional Notes
- 13:49, 17 October 2012 diff hist -4 Polymutt →Additional Notes
- 13:49, 17 October 2012 diff hist +2 Polymutt →Additional Notes
- 13:49, 17 October 2012 diff hist +470 Polymutt →Notes
- 13:04, 17 October 2012 diff hist +7 Polymutt
- 13:02, 17 October 2012 diff hist 0 File:Polymutt.0.12.tar.gz uploaded a new version of "File:Polymutt.0.12.tar.gz" current
- 13:01, 17 October 2012 diff hist 0 File:Polymutt.0.12.binary.tar.gz uploaded a new version of "File:Polymutt.0.12.binary.tar.gz" current
- 22:54, 16 October 2012 diff hist 0 Polymutt →Input files
- 22:52, 16 October 2012 diff hist +8 Polymutt →Input files
- 22:50, 16 October 2012 diff hist 0 Polymutt →Introduction
- 13:05, 12 October 2012 diff hist +2 Polymutt →Download
- 13:04, 12 October 2012 diff hist +7 Polymutt →Download
- 13:02, 12 October 2012 diff hist +15 Polymutt →Download
- 13:01, 12 October 2012 diff hist 0 File:Polymutt.0.12.binary.tar.gz uploaded a new version of "File:Polymutt.0.12.binary.tar.gz"
- 18:56, 10 October 2012 diff hist +1 Polymutt →Download
- 18:55, 10 October 2012 diff hist 0 N File:Polymutt.0.12.binary.tar.gz
- 18:55, 10 October 2012 diff hist -2 Polymutt →Download
- 18:55, 10 October 2012 diff hist -23 Polymutt →Download
- 18:50, 10 October 2012 diff hist +134 Polymutt →Download
- 18:40, 10 October 2012 diff hist 0 File:Polymutt.0.12.tar.gz uploaded a new version of "File:Polymutt.0.12.tar.gz"
- 18:39, 10 October 2012 diff hist +1 Polymutt →Contact
- 18:39, 10 October 2012 diff hist -67 Polymutt →Contact
- 17:16, 8 October 2012 diff hist +52 Polymutt →Input files
- 13:32, 8 October 2012 diff hist +5 Polymutt →Other options
- 13:25, 8 October 2012 diff hist 0 N File:Polymutt.0.12.tar.gz
- 13:24, 8 October 2012 diff hist 0 Polymutt →Download
- 13:24, 8 October 2012 diff hist 0 Polymutt →Updates
- 13:09, 8 October 2012 diff hist 0 Polymutt →Usage
- 13:08, 8 October 2012 diff hist -124 Polymutt →Usage
- 13:07, 8 October 2012 diff hist +52 Polymutt →Usage
- 13:06, 8 October 2012 diff hist +252 Polymutt →Usage
- 12:08, 8 October 2012 diff hist +17 Polymutt →Other options
- 12:06, 8 October 2012 diff hist +453 Polymutt →Other options
- 11:54, 8 October 2012 diff hist +47 Polymutt →Introduction
- 11:53, 8 October 2012 diff hist +15 Polymutt →Usage
- 11:52, 8 October 2012 diff hist +145 Polymutt →Input files
- 11:50, 8 October 2012 diff hist +231 Polymutt →Input files
- 11:47, 8 October 2012 diff hist +662 Polymutt →Input files
- 11:39, 8 October 2012 diff hist +19 Polymutt →Input files
- 11:38, 8 October 2012 diff hist +258 Polymutt →Input files
- 11:30, 8 October 2012 diff hist +2 Polymutt →Usage
- 11:30, 8 October 2012 diff hist +379 Polymutt →Usage
- 11:26, 8 October 2012 diff hist +107 Polymutt →Usage
- 11:20, 8 October 2012 diff hist +551 Polymutt →Introduction
- 15:29, 14 August 2012 diff hist 0 Bam read count →Introduction current
- 15:28, 14 August 2012 diff hist +113 Bam read count →Introduction
- 15:27, 14 August 2012 diff hist +19 Bam read count →Introduction
- 15:26, 14 August 2012 diff hist -2 Bam read count →Introduction
- 15:25, 14 August 2012 diff hist +48 Bam read count →Introduction
- 16:07, 3 August 2012 diff hist -1 Polymutt →Updates
- 15:48, 3 August 2012 diff hist +86 Bam read count →Download
- 15:44, 3 August 2012 diff hist -1 Bam read count →Download
- 15:43, 3 August 2012 diff hist 0 N File:Readcount.0.01.tar.gz current
- 15:43, 3 August 2012 diff hist +115 Bam read count
- 15:38, 3 August 2012 diff hist -2 Bam read count →Introduction
- 15:36, 3 August 2012 diff hist +78 Bam read count →Other options
- 15:35, 3 August 2012 diff hist -69 Bam read count →Other options
- 15:34, 3 August 2012 diff hist +220 Bam read count →Other options
- 15:31, 3 August 2012 diff hist 0 Bam read count →Input files
- 12:05, 26 June 2012 diff hist +285 Bam read count →Usage
- 17:02, 18 April 2012 diff hist 0 File:Polymutt.0.04.tar.gz uploaded a new version of "File:Polymutt.0.04.tar.gz" current
- 00:39, 17 April 2012 diff hist 0 Polymutt →Download
- 23:06, 16 April 2012 diff hist -7,592 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data Blanked the page
- 23:05, 16 April 2012 diff hist 0 Polymutt →Updates
- 23:04, 16 April 2012 diff hist 0 N File:Polymutt.0.04.tar.gz
- 23:04, 16 April 2012 diff hist 0 Polymutt →Download
- 00:46, 15 March 2012 diff hist 0 File:Polymutt.0.03.tar.gz uploaded a new version of "File:Polymutt.0.03.tar.gz" current
- 20:19, 14 March 2012 diff hist 0 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Updates
- 20:18, 14 March 2012 diff hist 0 Polymutt →Updates
- 20:18, 14 March 2012 diff hist 0 Polymutt →Download
- 20:17, 14 March 2012 diff hist 0 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Download
- 20:16, 14 March 2012 diff hist 0 Polymutt →Download
- 20:16, 14 March 2012 diff hist 0 N File:Polymutt.0.03.tar.gz
- 22:56, 13 March 2012 diff hist -172 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 22:55, 13 March 2012 diff hist -178 Polymutt →Updates
- 22:54, 13 March 2012 diff hist 0 File:Polymutt.0.02.tar.gz uploaded a new version of "File:Polymutt.0.02.tar.gz" current
- 22:51, 13 March 2012 diff hist 0 Polymutt →Download
- 12:12, 13 March 2012 diff hist 0 File:Polymutt.0.11.tar.gz uploaded a new version of "File:Polymutt.0.11.tar.gz" current
- 01:12, 7 March 2012 diff hist +6 Polymutt →Updates
- 01:11, 7 March 2012 diff hist +280 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 01:10, 7 March 2012 diff hist +4 Polymutt →Updates
- 01:10, 7 March 2012 diff hist 0 Polymutt →Updates
- 01:09, 7 March 2012 diff hist +3 Polymutt →Updates
- 01:09, 7 March 2012 diff hist -12 Polymutt →Updates
- 01:08, 7 March 2012 diff hist +4 Polymutt →Download
- 01:08, 7 March 2012 diff hist 0 Polymutt →Updates
- 01:08, 7 March 2012 diff hist +26 Polymutt →Updates
- 01:07, 7 March 2012 diff hist -107 Polymutt →Download
- 01:06, 7 March 2012 diff hist +237 Polymutt
- 01:02, 7 March 2012 diff hist +125 Polymutt →Download
- 01:00, 7 March 2012 diff hist 0 N File:Polymutt.0.11.tar.gz
- 18:22, 21 February 2012 diff hist +1 Bam read count →Introduction
- 18:14, 21 February 2012 diff hist +1 Bam read count →Contact
- 18:13, 21 February 2012 diff hist +806 Bam read count →Output files
- 18:11, 21 February 2012 diff hist +2,385 N Bam read count Created page with '== Introduction == * The tools calculates the read count for each region in the input list of regions from a BAM file, and also outputs the normalized read count as Read Per Mil…'
- 03:51, 17 February 2012 diff hist -3 QPLOT →Input files
- 03:48, 17 February 2012 diff hist +20 QPLOT →Input files
- 01:52, 16 February 2012 diff hist +52 QPLOT →Command line
- 01:44, 16 February 2012 diff hist +4 QPLOT →Parameters
- 01:44, 16 February 2012 diff hist +28 QPLOT →Parameters
- 01:43, 16 February 2012 diff hist +4 QPLOT →Parameters
- 01:36, 16 February 2012 diff hist -89 QPLOT →Where to Find It
- 01:33, 16 February 2012 diff hist +11 QPLOT →Where to Find It
- 01:29, 16 February 2012 diff hist -1,444 QPLOT →Gallery of examples
- 01:29, 16 February 2012 diff hist +67 QPLOT →Contact
- 01:28, 16 February 2012 diff hist -2 QPLOT →Gallery of examples
- 01:27, 16 February 2012 diff hist -2 QPLOT →Diagnose sequencing quality
- 01:27, 16 February 2012 diff hist -8 QPLOT →Gallery of examples
- 01:27, 16 February 2012 diff hist -76 QPLOT →Gallery of examples
- 01:26, 16 February 2012 diff hist 0 N File:Sardinia Run 84 QA.pdf current
- 01:25, 16 February 2012 diff hist +6 QPLOT →Gallery of examples
- 01:25, 16 February 2012 diff hist -8 QPLOT →Gallery of examples
- 01:22, 16 February 2012 diff hist -1 QPLOT →Gallery of examples
- 01:22, 16 February 2012 diff hist +6 QPLOT →Built-in example
- 01:21, 16 February 2012 diff hist +1 QPLOT →Built-in example
- 01:20, 16 February 2012 diff hist +10 QPLOT →Output files
- 01:19, 16 February 2012 diff hist +1 QPLOT →Output files
- 01:18, 16 February 2012 diff hist -55 QPLOT →Output files
- 01:17, 16 February 2012 diff hist +36 QPLOT →Parameters
- 01:15, 16 February 2012 diff hist +5 QPLOT →Parameters
- 01:14, 16 February 2012 diff hist -404 QPLOT →Parameters
- 00:35, 16 February 2012 diff hist +44 QPLOT →Where to Find It
- 12:02, 15 February 2012 diff hist +15 QPLOT →Binary Download
- 11:59, 15 February 2012 diff hist -9 QPLOT →Introduction
- 17:06, 11 February 2012 diff hist +6 Polymutt →Download
- 17:06, 11 February 2012 diff hist +6 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Download
- 17:05, 11 February 2012 diff hist 0 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Download
- 17:02, 11 February 2012 diff hist +12 N File:Polymutt.0.02.tar.gz Version 0.02
- 17:00, 11 February 2012 diff hist 0 Polymutt →Download
- 16:58, 11 February 2012 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz" current
- 16:47, 11 February 2012 diff hist +81 Polymutt
- 16:47, 11 February 2012 diff hist +81 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 16:38, 11 February 2012 diff hist +223 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 16:37, 11 February 2012 diff hist +173 Polymutt →Other options
- 16:33, 11 February 2012 diff hist +50 Polymutt →Usage
- 01:26, 11 February 2012 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz"
- 13:49, 6 February 2012 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz"
- 03:02, 28 January 2012 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz"
- 22:37, 19 January 2012 diff hist +2 QPLOT →Contact
- 22:37, 19 January 2012 diff hist +19 QPLOT →Contact
- 22:35, 19 January 2012 diff hist +97 QPLOT
- 17:28, 5 January 2012 diff hist +28 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Introduction
- 17:27, 5 January 2012 diff hist +28 Polymutt →Introduction
- 19:29, 26 December 2011 diff hist +23 Polymutt
- 19:28, 26 December 2011 diff hist +117 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 19:26, 26 December 2011 diff hist +117 Polymutt
- 17:21, 26 December 2011 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz"
- 17:19, 26 December 2011 diff hist +20 Polymutt
- 17:18, 26 December 2011 diff hist -20 Polymutt
- 18:48, 15 November 2011 diff hist 0 File:Polymutt.0.01.tar.gz uploaded a new version of "File:Polymutt.0.01.tar.gz"
- 11:17, 4 September 2011 diff hist -3 QPLOT →Input files
- 11:16, 4 September 2011 diff hist +27 QPLOT →Example output
- 11:15, 4 September 2011 diff hist -464 QPLOT →Example output
- 11:13, 4 September 2011 diff hist -176 QPLOT →Parameters
- 11:12, 4 September 2011 diff hist +7 QPLOT →Input files
- 11:11, 4 September 2011 diff hist +21 QPLOT →Input files
- 11:10, 4 September 2011 diff hist -157 QPLOT →Input files
- 23:46, 15 August 2011 diff hist 0 N File:Qplot.0.01.tar.gz current
- 12:43, 10 August 2011 diff hist 0 Main Page →Sequence Analysis Tools
- 12:42, 10 August 2011 diff hist 0 Main Page →Sequence Analysis Tools
- 12:41, 10 August 2011 diff hist -55 Main Page →Sequence Analysis Tools
- 12:41, 10 August 2011 diff hist +7,006 N Polymutt Created page with '== Introduction == * The program '''polymutt''' implemented a likelihood-based framework for calling '''single nucleotide variants''' and detecting '''''de novo''''' '''point mu…'
- 12:40, 10 August 2011 diff hist +134 Main Page →Sequence Analysis Tools
- 14:03, 13 July 2011 diff hist -84 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 14:02, 13 July 2011 diff hist 0 N File:Polymutt.0.01.tar.gz
- 13:57, 13 July 2011 diff hist +1 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 13:56, 13 July 2011 diff hist +153 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 13:45, 13 July 2011 diff hist -3 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data
- 18:35, 18 June 2011 diff hist 0 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Usage
- 18:33, 18 June 2011 diff hist +2 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:33, 18 June 2011 diff hist +1 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:31, 18 June 2011 diff hist -3 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:31, 18 June 2011 diff hist +2 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:30, 18 June 2011 diff hist -2 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:30, 18 June 2011 diff hist +2 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:30, 18 June 2011 diff hist +28 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:29, 18 June 2011 diff hist +38 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:26, 18 June 2011 diff hist +62 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Other options
- 18:24, 18 June 2011 diff hist +55 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data →Usage
- 09:56, 17 June 2011 diff hist -5 Software →Variant Calling
- 09:56, 17 June 2011 diff hist 0 Software →Variant Calling
- 09:56, 17 June 2011 diff hist +32 Software →Variant Calling
- 09:55, 17 June 2011 diff hist -2 Software →Variant Calling
- 09:54, 17 June 2011 diff hist -33 Software →Variant Calling
- 09:54, 17 June 2011 diff hist -2 Software →Variant Calling
- 09:53, 17 June 2011 diff hist +2 Software →Variant Calling
- 09:52, 17 June 2011 diff hist +97 Software →Variant Calling
- 09:50, 17 June 2011 diff hist +95 Software →Variant Calling
- 12:31, 25 October 2010 diff hist +72 Abecasis Group Awards
- 18:46, 15 July 2010 diff hist +6 Introduction to new students
- 18:45, 15 July 2010 diff hist +2 Introduction to new students
- 18:45, 15 July 2010 diff hist +49 Introduction to new students
- 18:43, 15 July 2010 diff hist +10 Introduction to new students
- 18:43, 15 July 2010 diff hist +19 Introduction to new students
- 18:41, 15 July 2010 diff hist +50 Introduction to new students
- 18:39, 15 July 2010 diff hist +1 Introduction to new students
- 18:38, 15 July 2010 diff hist -203 Introduction to new students
- 18:36, 15 July 2010 diff hist +81 Introduction to new students
- 18:35, 15 July 2010 diff hist +57 Introduction to new students
- 17:17, 18 March 2010 diff hist +2 BamUtil: bam2FastQ →How to use it
- 17:17, 18 March 2010 diff hist +12 BamUtil: bam2FastQ →How to use it
- 17:13, 18 March 2010 diff hist -4 BamUtil: bam2FastQ →How to use it
- 16:17, 18 March 2010 diff hist 0 BamUtil: bam2FastQ
- 16:08, 18 March 2010 diff hist +60 BamUtil: bam2FastQ
- 16:07, 18 March 2010 diff hist +878 BamUtil: bam2FastQ
- 15:17, 18 March 2010 diff hist -51 BamUtil: bam2FastQ
- 15:17, 18 March 2010 diff hist +3 BamUtil: bam2FastQ
- 15:16, 18 March 2010 diff hist -3 BamUtil: bam2FastQ
- 15:16, 18 March 2010 diff hist +309 BamUtil: bam2FastQ
- 15:13, 18 March 2010 diff hist +1 BamUtil: bam2FastQ →= Purpose
- 15:13, 18 March 2010 diff hist +36 BamUtil: bam2FastQ
- 15:12, 18 March 2010 diff hist +204 N BamUtil: bam2FastQ Created page with 'This converts a BAM file into FastQ files. This is necessary when only BAM files are delivered but a new alignment is desired. By converting BAM to FastQ files new alignments can…'
- 15:09, 18 March 2010 diff hist +77 Main Page →Sequence Analysis Tools