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Jump to navigationJump to search- 02:10, 15 November 2009 diff hist +1 Main Page →Variant Calling
- 01:52, 15 November 2009 diff hist +190 Abecasis Lab
- 01:49, 15 November 2009 diff hist +1 Abecasis Lab →Former Doctoral Students
- 01:49, 15 November 2009 diff hist +81 Abecasis Lab
- 01:48, 15 November 2009 diff hist +10 Abecasis Lab →Current Members
- 01:47, 15 November 2009 diff hist +831 N Abecasis Lab Created page with '== Current Members == === Research Faculty === Hyun Min Kang === Research Fellows === Bingshan Li === Graduate Students === Wei Chen Jun Ding Youna Hu Elizabeth Jewell Yanm…'
- 01:36, 15 November 2009 diff hist +223 N Genome Analysis Wiki:About Created page with 'This wiki documents useful tools and protocols for genome analysis. It is maintained by the Abecasis Lab at the [http://www.umich.edu University of Michigan] [http://csg.sp…' current
- 01:32, 15 November 2009 diff hist +116 GlfTrio →TODO
- 01:31, 15 November 2009 diff hist +171 GlfSingle
- 01:30, 15 November 2009 diff hist +2,153 N GlfMultiples Created page with ''''glfMultiples''' is a GLF-based variant caller for next-generation sequencing data. It takes a set of GLF format genotype likelihood files as input and generates a [[VC…'
- 00:53, 15 November 2009 diff hist +103 GLF
- 00:51, 15 November 2009 diff hist +10 GlfTrio →Filtering According to Depth and Map Quality
- 00:51, 15 November 2009 diff hist +39 GlfTrio →Basic Usage Example
- 00:48, 15 November 2009 diff hist +152 GlfTrio →Basic Usage Example
- 00:45, 15 November 2009 diff hist 0 GlfTrio →Filtering According to Depth and Map Quality
- 00:45, 15 November 2009 diff hist 0 GlfTrio →Basic Output Options
- 00:44, 15 November 2009 diff hist 0 GlfTrio →X Chromosome Variant Calling
- 00:43, 15 November 2009 diff hist 0 GlfTrio →Sample Labels
- 00:43, 15 November 2009 diff hist -8 GlfTrio →Filtering According to Depth and Map Quality
- 00:43, 15 November 2009 diff hist -8 GlfTrio →Basic Output Options
- 00:42, 15 November 2009 diff hist +2,881 N GlfTrio Created page with ''''glfTrio''' is a GLF-based variant caller for next-generation sequencing data. It takes three GLF format genotype likelihood files as input and generates a VCF-form…'
- 00:04, 15 November 2009 diff hist -2 Main Page →Welcome!
- 19:02, 14 November 2009 diff hist +177 N VCF Created page with ''''VCF''' is the Variant Calling Format. For the current specification, see [http://www.1000genomes.org/wiki/doku.php?id=1000_genomes:analysis:vcfv3.2 VCF format specification].'
- 19:00, 14 November 2009 diff hist +2 Main Page
- 18:59, 14 November 2009 diff hist +278 Main Page
- 18:55, 14 November 2009 diff hist +14 GLF →Last Record
- 18:54, 14 November 2009 diff hist +3,714 GLF
- 18:13, 14 November 2009 diff hist +962 GlfSingle
- 18:07, 14 November 2009 diff hist +556 N GLF Created page with ''''GLF''' is a format for storing marginal likelihoods for next-generation sequence data, conditional on a set of possible genotypes. === Generating GLF Files === GLF files can…'
- 17:59, 14 November 2009 diff hist +448 N GlfSingle Created page with ''''glfSingle''' is a GLF-based variant caller for next-generation sequencing data. It takes a GLF format genotype likelihood file as input and generates a VCF-format …'
- 17:44, 14 November 2009 diff hist +2 METAL Command Reference
- 17:43, 14 November 2009 diff hist +2,100 N METAL Command Reference Created page with '=== Describing Input Files === SEPARATOR [WHITESPACE|COMMA|BOTH|TAB] (default = WHITESPACE) COLUMNCOUNTING [STRICT|LENIENT] (default = 'STRICT') MARK…'
- 01:39, 14 November 2009 diff hist +1 Main Page
- 01:38, 14 November 2009 diff hist +7 Main Page
- 01:37, 14 November 2009 diff hist +2 Main Page
- 01:34, 14 November 2009 diff hist +59 Main Page
- 01:32, 14 November 2009 diff hist +40 N File:2009.08 Group Retreat Photo.jpg Photo from Group Retreat in August 2008.
- 13:52, 13 November 2009 diff hist +48 Karma
- 13:52, 13 November 2009 diff hist +25 N Karma Created page with 'Karma is top secret. Shh!'
- 13:51, 13 November 2009 diff hist +122 Main Page
- 02:19, 11 November 2009 diff hist +3 Main Page
- 02:18, 11 November 2009 diff hist -12 Main Page
- 02:18, 11 November 2009 diff hist -503 Main Page
- 02:17, 11 November 2009 diff hist +78 Main Page
- 02:16, 11 November 2009 diff hist +497 Main Page
- 02:15, 11 November 2009 diff hist +248 Main Page
- 01:38, 11 November 2009 diff hist -31 Main Page
- 01:37, 11 November 2009 diff hist +31 Main Page
- 01:30, 11 November 2009 diff hist 0 Main Page
- 11:52, 10 November 2009 diff hist -423 Main Page