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Jump to navigationJump to search- 11:05, 25 May 2010 diff hist +74 New Fugue →Linkage Disequilibrium File Options
- 11:04, 25 May 2010 diff hist -12 New Fugue →Command Line Options
- 11:04, 25 May 2010 diff hist +1,383 New Fugue
- 10:54, 25 May 2010 diff hist -26 New Fugue →Download
- 16:17, 24 May 2010 diff hist -56 MaCH →How do I get imputation quality estimates?
- 16:16, 24 May 2010 diff hist -3 MaCH →Does --mle overwrite input genotypes?
- 16:16, 24 May 2010 diff hist +28 MaCH →Does --mle overwrite fed-in genotypes?
- 16:14, 24 May 2010 diff hist -3 MaCH →Why and how to perform a 2-step imputation?
- 16:14, 24 May 2010 diff hist -3 MaCH →How is AL1 defined? Which allele dosage is .dose/.mldose counting?
- 16:13, 24 May 2010 diff hist -3 MaCH →How do I get reference files for an region of interest?
- 16:13, 24 May 2010 diff hist -2 MaCH →How do I get reference files for an region of interest?
- 16:12, 24 May 2010 diff hist -6 MaCH →How do I get reference files for an region of interest?
- 16:12, 24 May 2010 diff hist -110 MaCH →How do I get reference files for an region of interest?
- 16:10, 24 May 2010 diff hist -7 MaCH →Shall I apply QC before or after imputation? If so, how?
- 16:10, 24 May 2010 diff hist -9 MaCH →Shall I apply QC before or after imputation? If so, how?
- 16:10, 24 May 2010 diff hist +40 MaCH →Do I have to sort the pedigree file by physical positions?
- 16:09, 24 May 2010 diff hist 0 MaCH →What if I specified --states R where R exceeds the maximum possible (2*number diploid individuals - 2 + number_haplotypes)?
- 16:08, 24 May 2010 diff hist -536 MaCH →Can I used unphased reference?
- 16:01, 24 May 2010 diff hist +531 MaCH →How is AL1 defined? Which allele dosage is .dose/.mldose counting?
- 15:53, 24 May 2010 diff hist -20 MaCH →How is AL1 defined? Which allele dosage is .dose/.mldose counting?
- 07:15, 22 May 2010 diff hist 0 GlfMultiples →Download
- 13:07, 21 May 2010 diff hist +7 Generic Exome Analysis Plan →Read Mapping current
- 02:52, 21 May 2010 diff hist 0 GlfMultiples →Download
- 05:42, 20 May 2010 diff hist -1 GlfMultiples →VCF Output
- 05:42, 20 May 2010 diff hist -8 GlfMultiples →VCF Output
- 05:42, 20 May 2010 diff hist +413 GlfMultiples →Filtering According to Depth and Map Quality
- 05:38, 20 May 2010 diff hist +9 GlfMultiples →X Chromosome Variant Calling
- 05:38, 20 May 2010 diff hist +130 GlfMultiples →Model for Variant Calling
- 00:16, 20 May 2010 diff hist +22 Merlin current
- 00:16, 20 May 2010 diff hist 0 RelativeFinder →Alternative Relationships
- 00:15, 20 May 2010 diff hist +24 RelativeFinder →Alternative Relationships
- 00:14, 20 May 2010 diff hist +8 RelativeFinder →Alternative Relationships
- 00:14, 20 May 2010 diff hist +4,960 N RelativeFinder Created page with 'Category:Software '''relativeFinder''' is a program for checking relationships between pairs of individuals. There are many excellent programs that carry out similar tasks. S…'
- 22:11, 18 May 2010 diff hist +24 N ExomePicks Program moved ExomePicks Program to ExomePicks: Make naming consistent with that of other software utilities current
- 22:11, 18 May 2010 diff hist 0 m ExomePicks moved ExomePicks Program to ExomePicks: Make naming consistent with that of other software utilities
- 22:10, 18 May 2010 diff hist -1 MaCH
- 22:09, 18 May 2010 diff hist +14 MaCH
- 09:01, 17 May 2010 diff hist +273 METAL Documentation →Selecting an Analysis Scheme
- 08:57, 17 May 2010 diff hist +23 N LocusZoom Documentation moved LocusZoom Documentation to LocusZoom over redirect current
- 08:57, 17 May 2010 diff hist 0 m LocusZoom moved LocusZoom Documentation to LocusZoom over redirect
- 08:56, 17 May 2010 diff hist +19 N METAL Program moved METAL Program to METAL current
- 08:56, 17 May 2010 diff hist 0 m METAL moved METAL Program to METAL
- 13:54, 11 May 2010 diff hist +24 New Fugue
- 09:16, 11 May 2010 diff hist +702 N New Fugue Created page with '''New Fugue'' is a program for estimation of haplotype frequencies and linkage disequilibrium coefficients in family data. The current implementation uses the methods described b…'
- 01:48, 8 May 2010 diff hist +62 Abecasis Lab →Research Fellows
- 01:47, 8 May 2010 diff hist +24 Abecasis Lab →Staff
- 01:46, 8 May 2010 diff hist +1 Abecasis Lab →Research Fellows
- 01:46, 8 May 2010 diff hist +22 Abecasis Lab →Research Fellows
- 19:26, 7 May 2010 diff hist +2,205 TinySimulator →Command Line Options current
- 19:15, 7 May 2010 diff hist +22 TinySimulator