User contributions
From Genome Analysis Wiki
Jump to navigationJump to search- 22:30, 18 May 2015 diff hist +3 SeqShop: May 2015
- 10:58, 25 April 2015 diff hist +243 EPACTS →VCF file for Genotypes
- 16:14, 12 December 2014 diff hist -10 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:10, 12 December 2014 diff hist +12 SeqShop: Calling Your Own Genome, December 2014 →Extracting only exonic SNPs
- 14:56, 12 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014
- 14:55, 12 December 2014 diff hist +9 SeqShop: Calling Your Own Genome, December 2014 →More SNP Analysis
- 14:54, 12 December 2014 diff hist +3,684 SeqShop: Calling Your Own Genome, December 2014 →Friday
- 12:28, 10 December 2014 diff hist -98 SeqShop: Analysis of Structural Variation Practical, December 2014 →Command Line Usage of GenomeSTRiP pipeline
- 12:27, 10 December 2014 diff hist +57 SeqShop: Analysis of Structural Variation Practical, December 2014 →Command Line Usage of GenomeSTRiP pipeline
- 12:27, 10 December 2014 diff hist +13 SeqShop: Analysis of Structural Variation Practical, December 2014 →Command Line Usage of GenomeSTRiP pipeline
- 12:26, 10 December 2014 diff hist +14 SeqShop: Analysis of Structural Variation Practical, December 2014 →Command Line Usage of GenomeSTRiP pipeline
- 12:25, 10 December 2014 diff hist +128 SeqShop: Analysis of Structural Variation Practical, December 2014 →Command Line Usage of GenomeSTRiP pipeline
- 12:23, 10 December 2014 diff hist +3,444 SeqShop: Analysis of Structural Variation Practical, December 2014 →Overview of GotCloud/GenomeSTRiP pipeline
- 12:21, 10 December 2014 diff hist 0 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Discovery Pipeline
- 12:21, 10 December 2014 diff hist 0 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Genotyping Pipeline
- 10:40, 10 December 2014 diff hist -1 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline
- 10:37, 10 December 2014 diff hist -38 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline
- 10:36, 10 December 2014 diff hist -5 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Genotyping Pipeline
- 10:33, 10 December 2014 diff hist +16 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 10:32, 10 December 2014 diff hist -4 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 10:31, 10 December 2014 diff hist -1 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 10:31, 10 December 2014 diff hist +154 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 10:23, 10 December 2014 diff hist -179 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Genotyping Pipeline
- 10:22, 10 December 2014 diff hist -5 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Discovery Pipeline
- 10:16, 10 December 2014 diff hist +3 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 08:43, 10 December 2014 diff hist 0 N File:Dec2014 Analysis of SV part 2.pdf current
- 08:43, 10 December 2014 diff hist +30 SeqShop: December 2014
- 02:37, 10 December 2014 diff hist -16 SeqShop: Analysis of Structural Variation Practical, December 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 19:41, 9 December 2014 diff hist -26 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 19:39, 9 December 2014 diff hist -24 SeqShop: Analysis of Structural Variation Practical, December 2014 →Sequnce Alignment Files: BAM Files and Index Files
- 16:46, 9 December 2014 diff hist -196 SeqShop: Analysis of Structural Variation Practical, December 2014 →GotCloud Configuration File
- 16:44, 9 December 2014 diff hist -33 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 16:42, 9 December 2014 diff hist -524 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 16:40, 9 December 2014 diff hist +18 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 16:38, 9 December 2014 diff hist +1 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 16:38, 9 December 2014 diff hist +1,141 SeqShop: Analysis of Structural Variation Practical, December 2014 →Reference Files
- 16:34, 9 December 2014 diff hist -25 SeqShop: Analysis of Structural Variation Practical, December 2014
- 22:11, 8 December 2014 diff hist +34 SeqShop: December 2014
- 22:10, 8 December 2014 diff hist 0 N File:Seqshop dec14 day2 snp lecture v2.pdf current
- 14:49, 27 August 2014 diff hist +1 EMMAX →= NaN in the kinship file
- 14:49, 27 August 2014 diff hist +220 EMMAX →Frequently asked Questions
- 08:15, 23 July 2014 diff hist 0 EMMAX →Effect allele
- 12:35, 11 July 2014 diff hist -6 SeqShop: Analysis of Structural Variation Practical, June 2014 →Running GotCloud/GenomeSTRiP Metadata Pipeline
- 12:31, 11 July 2014 diff hist -72 SeqShop: Analysis of Structural Variation Practical, June 2014 →Why do we use GotCloud/GenomeSTRiP pipeline instead of directly using GenomeSTRiP itself?
- 12:42, 10 July 2014 diff hist +89 EPACTS
- 12:41, 10 July 2014 diff hist +79 EPACTS
- 12:40, 10 July 2014 diff hist +79 EPACTS →Lastest ChangeLog
- 16:00, 19 June 2014 diff hist -1 SeqShop: Genetic Association Analysis Practical, June 2014 →Setup your run environment
- 15:31, 19 June 2014 diff hist +9 SeqShop: Genetic Association Analysis Practical, June 2014
- 12:51, 19 June 2014 diff hist 0 SeqShop: Genetic Association Analysis Practical, June 2014 →Goals of This Session