User contributions
From Genome Analysis Wiki
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- 20:07, 6 April 2010 (diff | hist) . . (+55) . . C++ Class: SamRecord
- 20:06, 6 April 2010 (diff | hist) . . (+55) . . C++ Class: SamFileHeader
- 20:06, 6 April 2010 (diff | hist) . . (+54) . . C++ Class: SamFile
- 20:03, 6 April 2010 (diff | hist) . . (-29) . . C++ Class: SamFile
- 19:57, 6 April 2010 (diff | hist) . . (+136) . . LibStatGen: BAM
- 19:51, 6 April 2010 (diff | hist) . . (+70) . . Main Page
- 19:50, 6 April 2010 (diff | hist) . . (+49) . . N Talk:FastQ Validator (moved Talk:FastQ Validator to Talk:C++ Executable: fastQValidator) (current)
- 19:50, 6 April 2010 (diff | hist) . . (0) . . m Talk:FastQValidator (moved Talk:FastQ Validator to Talk:C++ Executable: fastQValidator)
- 19:50, 6 April 2010 (diff | hist) . . (+44) . . N FastQ Validator (moved FastQ Validator to C++ Executable: fastQValidator) (current)
- 19:50, 6 April 2010 (diff | hist) . . (0) . . m FastQValidator (moved FastQ Validator to C++ Executable: fastQValidator)
- 18:35, 6 April 2010 (diff | hist) . . (0) . . C++ Library: general Change Log
- 18:35, 6 April 2010 (diff | hist) . . (+278) . . C++ Library: general Change Log
- 18:34, 6 April 2010 (diff | hist) . . (+304) . . N C++ Library: FASTQ Change Log (Created page with '=libfqf Change Log = This page tracks the updates/enhancements that have been updated in the git repository. It is primarily used to track the user interface changes, so users c…')
- 18:31, 6 April 2010 (diff | hist) . . (+52) . . C++ Class: FastQFile
- 18:12, 6 April 2010 (diff | hist) . . (-10,036) . . LibStatGen: FASTQ
- 18:12, 6 April 2010 (diff | hist) . . (+28) . . LibStatGen: general (→Classes in the FastQFile Library)
- 18:11, 6 April 2010 (diff | hist) . . (+10,283) . . C++ Class: FastQFile
- 17:40, 6 April 2010 (diff | hist) . . (+950) . . N C++ Class: FastQFile (Created page with '== Reading/Validating FastQ Files In Your Program == The '''FastQFile''' class allows a user to easily read/validate a fastq file. === Class Methods === {| style="margin: 1em 1…')
- 17:34, 6 April 2010 (diff | hist) . . (+141) . . LibStatGen: FASTQ
- 17:33, 6 April 2010 (diff | hist) . . (+404) . . LibStatGen: FASTQ
- 17:32, 6 April 2010 (diff | hist) . . (+749) . . N LibStatGen: general (Created page with '= libcsg = This library contains utility classes that are useful for many of the other developed software programs/libraries. See C++ Library: libcsg Change Log for a list o…')
- 17:20, 6 April 2010 (diff | hist) . . (+33) . . N FastQFile (moved FastQFile to C++ Library: libfqf) (current)
- 17:20, 6 April 2010 (diff | hist) . . (0) . . m LibStatGen: FASTQ (moved FastQFile to C++ Library: libfqf)
- 17:20, 6 April 2010 (diff | hist) . . (+3) . . LibStatGen: BAM
- 17:19, 6 April 2010 (diff | hist) . . (+33) . . N C++ Library: bam (moved C++ Library: bam to C++ Library: libbam) (current)
- 17:19, 6 April 2010 (diff | hist) . . (0) . . m LibStatGen: BAM (moved C++ Library: bam to C++ Library: libbam)
- 17:10, 6 April 2010 (diff | hist) . . (+847) . . BamUtil
- 17:09, 6 April 2010 (diff | hist) . . (-584) . . LibStatGen: BAM
- 17:02, 6 April 2010 (diff | hist) . . (+5) . . LibStatGen: BAM
- 16:56, 6 April 2010 (diff | hist) . . (+391) . . LibStatGen: BAM
- 16:42, 6 April 2010 (diff | hist) . . (+30) . . N BamFile (moved BamFile to C++ Library: bam) (current)
- 16:42, 6 April 2010 (diff | hist) . . (0) . . m LibStatGen: BAM (moved BamFile to C++ Library: bam)
- 16:41, 6 April 2010 (diff | hist) . . (+60) . . C++ Class: SamFileHeader
- 16:41, 6 April 2010 (diff | hist) . . (+528) . . C++ Class: SamRecord
- 16:23, 6 April 2010 (diff | hist) . . (+53) . . C++ Class: SamFile
- 16:20, 6 April 2010 (diff | hist) . . (-1,444) . . C++ Class: SamFile
- 13:43, 6 April 2010 (diff | hist) . . (+606) . . BamUtil
- 11:58, 6 April 2010 (diff | hist) . . (+111) . . BamUtil
- 11:57, 6 April 2010 (diff | hist) . . (+661) . . BamUtil
- 11:50, 6 April 2010 (diff | hist) . . (+425) . . N BamUtil (Created page with '= bam Executable = The bam executable has the following functions. * Read and Validate a SAM/BAM file * Read a SAM/BAM fi…')
- 11:27, 6 April 2010 (diff | hist) . . (+687) . . C++ Class: SamFile (→Class Methods)
- 11:13, 6 April 2010 (diff | hist) . . (+495) . . C++ Class: SamRecord
- 11:10, 6 April 2010 (diff | hist) . . (+9,448) . . N C++ Class: SamRecord (Created page with '== Setting fields in a SAM/BAM Record == The '''SamRecord''' class contains accessors to set the fields of a SAM/BAM record. They are used for creating a record that is not read…')
- 11:10, 6 April 2010 (diff | hist) . . (-9,183) . . LibStatGen: BAM
- 11:06, 6 April 2010 (diff | hist) . . (+2,135) . . N C++ Class: SamFileHeader (Created page with '== SamFileHeader == This class allows a user to get/set the fields in a SAM/BAM Header. === Setting fields in the Header === The '''SamFileHeader''' class contains accessors to …')
- 11:03, 6 April 2010 (diff | hist) . . (-1,282) . . LibStatGen: BAM
- 10:56, 6 April 2010 (diff | hist) . . (+573) . . C++ Class: SamFile
- 10:48, 6 April 2010 (diff | hist) . . (+470) . . C++ Class: SamFile
- 10:41, 6 April 2010 (diff | hist) . . (+726) . . C++ Class: SamFile (→Usage Example)
- 10:09, 6 April 2010 (diff | hist) . . (-2) . . C++ Class: SamFile (→Usage Example)
- 10:05, 6 April 2010 (diff | hist) . . (-7,903) . . LibStatGen: BAM (→Reading/Writing SAM/BAM Files In Your Program)
- 10:04, 6 April 2010 (diff | hist) . . (+130) . . C++ Class: SamFile
- 10:00, 6 April 2010 (diff | hist) . . (+34) . . C++ Class: SamFile
- 09:56, 6 April 2010 (diff | hist) . . (+34) . . LibStatGen: BAM
- 09:49, 6 April 2010 (diff | hist) . . (+17) . . LibStatGen: BAM (→Usage Example)
- 09:46, 6 April 2010 (diff | hist) . . (-4) . . C++ Library: general Change Log
- 09:46, 6 April 2010 (diff | hist) . . (-36) . . C++ Library: general Change Log
- 09:46, 6 April 2010 (diff | hist) . . (+7) . . C++ Library: general Change Log (→4/5/2010)
- 09:45, 6 April 2010 (diff | hist) . . (+715) . . N C++ Library: general Change Log (Created page with '= C++ Library: libcsg Change Log = == Enhancements/Updates/Fixes == === 4/5/2010 === * Modified '''IFILE''' class methods ''ifread''' & '''readFromFile''' to return an '''int''…')
- 15:39, 2 April 2010 (diff | hist) . . (0) . . LibStatGen: BAM (→SAM/BAM File)
- 15:38, 2 April 2010 (diff | hist) . . (-11) . . LibStatGen: FASTQ
- 15:37, 2 April 2010 (diff | hist) . . (+325) . . LibStatGen: FASTQ
- 15:34, 2 April 2010 (diff | hist) . . (+363) . . FastQValidator
- 09:33, 31 March 2010 (diff | hist) . . (-4) . . LibStatGen: BAM (→SAM/BAM File)
- 09:18, 31 March 2010 (diff | hist) . . (-12) . . C++ Class: SamFile
- 16:26, 29 March 2010 (diff | hist) . . (+962) . . LibStatGen: BAM
- 08:37, 26 March 2010 (diff | hist) . . (+470) . . LibStatGen: BAM
- 16:29, 25 March 2010 (diff | hist) . . (+86) . . LibStatGen: BAM
- 16:19, 25 March 2010 (diff | hist) . . (+31) . . LibStatGen: BAM
- 15:09, 25 March 2010 (diff | hist) . . (+364) . . LibStatGen: BAM
- 14:29, 25 March 2010 (diff | hist) . . (+41) . . FastQValidator
- 14:24, 25 March 2010 (diff | hist) . . (-2) . . FastQValidator (→Status)
- 14:23, 25 March 2010 (diff | hist) . . (+126) . . FastQValidator
- 10:58, 25 March 2010 (diff | hist) . . (+92) . . FastQValidator
- 10:56, 25 March 2010 (diff | hist) . . (+350) . . FastQValidator
- 10:54, 25 March 2010 (diff | hist) . . (+513) . . LibStatGen: FASTQ
- 09:12, 25 March 2010 (diff | hist) . . (+61) . . Main Page
- 16:46, 24 March 2010 (diff | hist) . . (+48) . . LibStatGen: BAM
- 16:41, 24 March 2010 (diff | hist) . . (+4,673) . . LibStatGen: BAM
- 13:09, 23 March 2010 (diff | hist) . . (-1) . . LibStatGen: BAM (→Reading/Writing SAM/BAM Files In Your Program)
- 13:09, 23 March 2010 (diff | hist) . . (+969) . . LibStatGen: BAM
- 14:47, 22 March 2010 (diff | hist) . . (+2) . . SAM Validation Criteria (→BamFile Class)
- 14:47, 22 March 2010 (diff | hist) . . (+34) . . SAM Validation Criteria
- 14:44, 22 March 2010 (diff | hist) . . (+37) . . N BamFile/SAM Validation Criteria (moved BamFile/SAM Validation Criteria to SAM Validation Criteria over redirect) (current)
- 14:44, 22 March 2010 (diff | hist) . . (0) . . m SAM Validation Criteria (moved BamFile/SAM Validation Criteria to SAM Validation Criteria over redirect)
- 14:42, 22 March 2010 (diff | hist) . . (0) . . m SAM Validation Criteria (moved SAM Validation Criteria to BamFile/SAM Validation Criteria)
- 11:23, 19 March 2010 (diff | hist) . . (+160) . . LibStatGen: BAM
- 18:22, 18 March 2010 (diff | hist) . . (+530) . . SAM Validation Criteria
- 12:01, 18 March 2010 (diff | hist) . . (+75) . . SAM Validation Criteria
- 09:47, 18 March 2010 (diff | hist) . . (+9) . . LibStatGen: BAM
- 09:47, 18 March 2010 (diff | hist) . . (+293) . . LibStatGen: BAM (→Setting fields in a SAM/BAM Header)
- 14:52, 17 March 2010 (diff | hist) . . (+1,965) . . SAM Validation Criteria (→SAM Alignment Validation)
- 14:44, 17 March 2010 (diff | hist) . . (+1,638) . . SAM Validation Criteria
- 14:38, 17 March 2010 (diff | hist) . . (+52) . . SAM Validation Criteria
- 14:30, 17 March 2010 (diff | hist) . . (+2,441) . . N SAM Validation Criteria (Created page with '=== SAM Header Validation Rules === TODO === SAM Alignment Validation === {| class="wikitable" style="width:100%" border="1" |+ style="font-size:150%"|'''SAM Alignment Record'''…')
- 14:29, 17 March 2010 (diff | hist) . . (+73) . . LibStatGen: BAM
- 11:43, 17 March 2010 (diff | hist) . . (+3) . . LibStatGen: BAM (→Read & Write BAM/SAM Executable)
- 11:42, 17 March 2010 (diff | hist) . . (+404) . . LibStatGen: BAM
- 11:38, 17 March 2010 (diff | hist) . . (+426) . . LibStatGen: BAM
- 17:08, 16 March 2010 (diff | hist) . . (+1,656) . . LibStatGen: BAM (→Retrieving fields from a SAM/BAM Record)
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