User contributions
From Genome Analysis Wiki
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- 10:05, 6 April 2010 (diff | hist) . . (-7,903) . . LibStatGen: BAM (→Reading/Writing SAM/BAM Files In Your Program)
- 10:04, 6 April 2010 (diff | hist) . . (+130) . . C++ Class: SamFile
- 10:00, 6 April 2010 (diff | hist) . . (+34) . . C++ Class: SamFile
- 09:56, 6 April 2010 (diff | hist) . . (+34) . . LibStatGen: BAM
- 09:49, 6 April 2010 (diff | hist) . . (+17) . . LibStatGen: BAM (→Usage Example)
- 09:46, 6 April 2010 (diff | hist) . . (-4) . . C++ Library: general Change Log
- 09:46, 6 April 2010 (diff | hist) . . (-36) . . C++ Library: general Change Log
- 09:46, 6 April 2010 (diff | hist) . . (+7) . . C++ Library: general Change Log (→4/5/2010)
- 09:45, 6 April 2010 (diff | hist) . . (+715) . . N C++ Library: general Change Log (Created page with '= C++ Library: libcsg Change Log = == Enhancements/Updates/Fixes == === 4/5/2010 === * Modified '''IFILE''' class methods ''ifread''' & '''readFromFile''' to return an '''int''…')
- 15:39, 2 April 2010 (diff | hist) . . (0) . . LibStatGen: BAM (→SAM/BAM File)
- 15:38, 2 April 2010 (diff | hist) . . (-11) . . LibStatGen: FASTQ
- 15:37, 2 April 2010 (diff | hist) . . (+325) . . LibStatGen: FASTQ
- 15:34, 2 April 2010 (diff | hist) . . (+363) . . FastQValidator
- 09:33, 31 March 2010 (diff | hist) . . (-4) . . LibStatGen: BAM (→SAM/BAM File)
- 09:18, 31 March 2010 (diff | hist) . . (-12) . . C++ Class: SamFile
- 16:26, 29 March 2010 (diff | hist) . . (+962) . . LibStatGen: BAM
- 08:37, 26 March 2010 (diff | hist) . . (+470) . . LibStatGen: BAM
- 16:29, 25 March 2010 (diff | hist) . . (+86) . . LibStatGen: BAM
- 16:19, 25 March 2010 (diff | hist) . . (+31) . . LibStatGen: BAM
- 15:09, 25 March 2010 (diff | hist) . . (+364) . . LibStatGen: BAM
- 14:29, 25 March 2010 (diff | hist) . . (+41) . . FastQValidator
- 14:24, 25 March 2010 (diff | hist) . . (-2) . . FastQValidator (→Status)
- 14:23, 25 March 2010 (diff | hist) . . (+126) . . FastQValidator
- 10:58, 25 March 2010 (diff | hist) . . (+92) . . FastQValidator
- 10:56, 25 March 2010 (diff | hist) . . (+350) . . FastQValidator
- 10:54, 25 March 2010 (diff | hist) . . (+513) . . LibStatGen: FASTQ
- 09:12, 25 March 2010 (diff | hist) . . (+61) . . Main Page
- 16:46, 24 March 2010 (diff | hist) . . (+48) . . LibStatGen: BAM
- 16:41, 24 March 2010 (diff | hist) . . (+4,673) . . LibStatGen: BAM
- 13:09, 23 March 2010 (diff | hist) . . (-1) . . LibStatGen: BAM (→Reading/Writing SAM/BAM Files In Your Program)
- 13:09, 23 March 2010 (diff | hist) . . (+969) . . LibStatGen: BAM
- 14:47, 22 March 2010 (diff | hist) . . (+2) . . SAM Validation Criteria (→BamFile Class)
- 14:47, 22 March 2010 (diff | hist) . . (+34) . . SAM Validation Criteria
- 14:44, 22 March 2010 (diff | hist) . . (0) . . m SAM Validation Criteria (moved BamFile/SAM Validation Criteria to SAM Validation Criteria over redirect)
- 14:44, 22 March 2010 (diff | hist) . . (+37) . . N BamFile/SAM Validation Criteria (moved BamFile/SAM Validation Criteria to SAM Validation Criteria over redirect) (current)
- 14:42, 22 March 2010 (diff | hist) . . (0) . . m SAM Validation Criteria (moved SAM Validation Criteria to BamFile/SAM Validation Criteria)
- 11:23, 19 March 2010 (diff | hist) . . (+160) . . LibStatGen: BAM
- 18:22, 18 March 2010 (diff | hist) . . (+530) . . SAM Validation Criteria
- 12:01, 18 March 2010 (diff | hist) . . (+75) . . SAM Validation Criteria
- 09:47, 18 March 2010 (diff | hist) . . (+9) . . LibStatGen: BAM
- 09:47, 18 March 2010 (diff | hist) . . (+293) . . LibStatGen: BAM (→Setting fields in a SAM/BAM Header)
- 14:52, 17 March 2010 (diff | hist) . . (+1,965) . . SAM Validation Criteria (→SAM Alignment Validation)
- 14:44, 17 March 2010 (diff | hist) . . (+1,638) . . SAM Validation Criteria
- 14:38, 17 March 2010 (diff | hist) . . (+52) . . SAM Validation Criteria
- 14:30, 17 March 2010 (diff | hist) . . (+2,441) . . N SAM Validation Criteria (Created page with '=== SAM Header Validation Rules === TODO === SAM Alignment Validation === {| class="wikitable" style="width:100%" border="1" |+ style="font-size:150%"|'''SAM Alignment Record'''…')
- 14:29, 17 March 2010 (diff | hist) . . (+73) . . LibStatGen: BAM
- 11:43, 17 March 2010 (diff | hist) . . (+3) . . LibStatGen: BAM (→Read & Write BAM/SAM Executable)
- 11:42, 17 March 2010 (diff | hist) . . (+404) . . LibStatGen: BAM
- 11:38, 17 March 2010 (diff | hist) . . (+426) . . LibStatGen: BAM
- 17:08, 16 March 2010 (diff | hist) . . (+1,656) . . LibStatGen: BAM (→Retrieving fields from a SAM/BAM Record)
- 15:53, 16 March 2010 (diff | hist) . . (+1,708) . . LibStatGen: BAM
- 15:28, 16 March 2010 (diff | hist) . . (-3) . . LibStatGen: BAM
- 14:58, 16 March 2010 (diff | hist) . . (+1,092) . . LibStatGen: BAM
- 14:51, 16 March 2010 (diff | hist) . . (+4,054) . . LibStatGen: BAM
- 13:46, 16 March 2010 (diff | hist) . . (+1,121) . . LibStatGen: BAM
- 13:42, 16 March 2010 (diff | hist) . . (+1,464) . . N LibStatGen: BAM (Created page with '= SAM/BAM File= == Reading/Writing SAM/BAM Files == The SamFile class allows a user to easily read/write a SAM/BAM file. This methods found in this class are: {| class="wikitabl…')
- 13:26, 16 March 2010 (diff | hist) . . (+174) . . LibStatGen: FASTQ
- 22:25, 15 March 2010 (diff | hist) . . (+140) . . LibStatGen: FASTQ
- 15:23, 15 March 2010 (diff | hist) . . (+780) . . LibStatGen: FASTQ
- 17:19, 12 March 2010 (diff | hist) . . (+31) . . LibStatGen: FASTQ
- 17:18, 12 March 2010 (diff | hist) . . (+1,576) . . LibStatGen: FASTQ
- 13:44, 1 March 2010 (diff | hist) . . (+66) . . FastQValidator
- 15:58, 22 February 2010 (diff | hist) . . (+88) . . FastQValidator
- 15:02, 22 February 2010 (diff | hist) . . (+187) . . FastQValidator
- 15:01, 22 February 2010 (diff | hist) . . (+666) . . LibStatGen: FASTQ
- 14:47, 22 February 2010 (diff | hist) . . (+46) . . LibStatGen: FASTQ
- 14:46, 22 February 2010 (diff | hist) . . (-40) . . LibStatGen: FASTQ (→How to Use the fastQFile Library)
- 14:17, 22 February 2010 (diff | hist) . . (+43) . . FastQValidator
- 14:16, 22 February 2010 (diff | hist) . . (+407) . . LibStatGen: FASTQ
- 14:16, 22 February 2010 (diff | hist) . . (-60) . . FastQValidator
- 14:01, 22 February 2010 (diff | hist) . . (+6) . . LibStatGen: FASTQ
- 13:58, 22 February 2010 (diff | hist) . . (+68) . . LibStatGen: FASTQ
- 13:56, 22 February 2010 (diff | hist) . . (0) . . LibStatGen: FASTQ (→Validation Criteria Used FOr Reading a Sequence)
- 13:56, 22 February 2010 (diff | hist) . . (+69) . . FastQValidator (→Valid FastQ File Requirements)
- 13:56, 22 February 2010 (diff | hist) . . (-21) . . LibStatGen: FASTQ (→Validation Criteria Used for Reporting Errors as a Sequence is Read)
- 13:52, 22 February 2010 (diff | hist) . . (+1,886) . . FastQValidator
- 13:52, 22 February 2010 (diff | hist) . . (-3,533) . . LibStatGen: FASTQ
- 13:25, 22 February 2010 (diff | hist) . . (+2) . . Main Page (→Quality Control Utilities)
- 13:25, 22 February 2010 (diff | hist) . . (+96) . . Main Page (→Quality Control Utilities)
- 12:43, 19 February 2010 (diff | hist) . . (+34) . . FastQValidator (→Status)
- 12:43, 19 February 2010 (diff | hist) . . (-6) . . FastQValidator (→Status)
- 12:43, 19 February 2010 (diff | hist) . . (0) . . m LibStatGen: FASTQ (moved FastQValidator to FastQFile: Updated the class for more functionality)
- 12:41, 19 February 2010 (diff | hist) . . (+1) . . LibStatGen: FASTQ
- 12:41, 19 February 2010 (diff | hist) . . (+370) . . LibStatGen: FASTQ
- 12:37, 19 February 2010 (diff | hist) . . (+1,622) . . LibStatGen: FASTQ
- 15:28, 5 February 2010 (diff | hist) . . (+1,167) . . LibStatGen: FASTQ
- 14:25, 5 February 2010 (diff | hist) . . (+674) . . LibStatGen: FASTQ
- 12:55, 5 February 2010 (diff | hist) . . (+88) . . LibStatGen: FASTQ
- 15:19, 4 February 2010 (diff | hist) . . (+1) . . LibStatGen: FASTQ
- 15:19, 4 February 2010 (diff | hist) . . (+86) . . LibStatGen: FASTQ (→Validation Criteria)
- 14:59, 4 February 2010 (diff | hist) . . (+984) . . LibStatGen: FASTQ
- 14:54, 4 February 2010 (diff | hist) . . (+171) . . LibStatGen: FASTQ
- 14:42, 4 February 2010 (diff | hist) . . (+847) . . LibStatGen: FASTQ
- 14:34, 4 February 2010 (diff | hist) . . (+1,581) . . LibStatGen: FASTQ
- 14:18, 4 February 2010 (diff | hist) . . (+440) . . LibStatGen: FASTQ
- 12:44, 4 February 2010 (diff | hist) . . (+205) . . LibStatGen: FASTQ (→Sequence Identifier Line)
- 17:44, 3 February 2010 (diff | hist) . . (+1,227) . . LibStatGen: FASTQ
- 11:48, 3 February 2010 (diff | hist) . . (+50) . . LibStatGen: FASTQ
- 11:37, 3 February 2010 (diff | hist) . . (+993) . . N LibStatGen: FASTQ (Created page with '== How to Use the fastQValidator Executable == '''Required Parameters:''' -f : FastQ filename with path to be prorcessed. '''Optional Parameters:''' -l : Min…')
- 10:58, 3 February 2010 (diff | hist) . . (+67) . . FastQValidator
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