User contributions
19 May 2015
SeqShop: Ancestry On Your Own Genome, May 2015
Setup your terminal
-715
SeqShop: Calling Your Own Genome, May 2015
Thursday
+13
SeqShop: Calling Your Own Genome, May 2015
Thursday
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SeqShop: Variant Calling and Filtering for INDELs Practical, May 2015
no edit summary
-1,137
SeqShop: Calling Your Own Genome, May 2015
Log Out
+138
SeqShop: Calling Your Own Genome, May 2015
Running INDEL
+14
SeqShop: Calling Your Own Genome, May 2015
Configuring Indel
-47
18 May 2015
SeqShop: Calling Your Own Genome, May 2015
FEEDBACK!
+1
SeqShop: Calling Your Own Genome, May 2015
Log Out
+140
SeqShop: Calling Your Own Genome, May 2015
Wednesday
-16
SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline
-8
SeqShop: Calling Your Own Genome, May 2015
Running SNP Calling
+25
SeqShop: Calling Your Own Genome, May 2015
Start SNP Calling
-1,601
SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP Genotyping Pipeline
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SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP Discovery Pipeline
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SeqShop: Analysis of Structural Variation Practical, May 2015
Setup
-13
SeqShop: Analysis of Structural Variation Practical, May 2015
Setup
+13
SeqShop: Analysis of Structural Variation Practical, May 2015
no edit summary
-1,048
SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015
Running GotCloud Genotype Refinement
SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015
Run GotCloud SnpCall
SeqShop: Calling Your Own Genome, May 2015
Setup Variables
+48
SeqShop: Calling Your Own Genome, May 2015
no edit summary
SeqShop: Calling Your Own Genome, May 2015
Tuesday - Start INDEL Calling
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SeqShop: Calling Your Own Genome, May 2015
Need a BAM Index File?
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SeqShop: Aligning Your Own Genome, May 2015
no edit summary
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17 May 2015
SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015
no edit summary
-1,185
SeqShop: May 2015
no edit summary
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File:Mapping and assembly May2015.pdf
no edit summary
File:Analysis of SV May2015.pdf
no edit summary
File:Mapping and assembly.pdf
Mktrost uploaded a new version of "File:Mapping and assembly.pdf": Reverted to version as of 13:19, 16 June 2014
File:Mapping and assembly.pdf
Mktrost uploaded a new version of "File:Mapping and assembly.pdf"
SeqShop: Aligning Your Own Genome, May 2015
Recalibration Comparison
+13
SeqShop: Aligning Your Own Genome, May 2015
no edit summary
+1
Template:SeqShopLoginSubMachine
Login to the seqshop Machine
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SeqShop: Sequence Mapping and Assembly Practical, May 2015
Setup
SeqShop: Sequence Mapping and Assembly Practical, May 2015
no edit summary
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Template:SeqShopLogin
no edit summary
+9
Template:SeqShopLoginSubMachine
Created page with "=== Login to the seqshop Machine === So you can each run multiple jobs at once, we will have you run on 4 different machines within our seqshop setup. * You can only access th..."
Template:SeqShopLogin
Replaced content with "{{SeqShopLoginA}} {{SeqShopLoginB}}"
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Template:SeqShopLoginA
Created page with "=== Login to the seqshop-server Linux Machine === <div class="mw-collapsible" style="width:600px"> '' This section will appear redundantly in each session. If you are already ..."
File:May2015 SeqShop - GotCloud indel.pdf
no edit summary
SeqShop: Variant Calling and Filtering for INDELs Practical, May 2015
Introduction
SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015
Introduction
File:May2015 SeqShop - GotCloud snpcall.pdf
no edit summary
SeqShop: Aligning Your Own Genome, May 2015
FEEDBACK!
File:May2015 SeqShop - GotCloud Align.pdf
no edit summary
SeqShop: Sequence Mapping and Assembly Practical, May 2015
Introduction
SeqShop: Sequence Mapping and Assembly Practical, May 2015
no edit summary
SeqShop: Sequence Mapping and Assembly Practical
Redirected page to SeqShop: Sequence Mapping and Assembly Practical, May 2015
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File:May2015 SeqShop - Linux.pdf
Mktrost uploaded a new version of "File:May2015 SeqShop - Linux.pdf"
