User contributions
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Jump to navigationJump to search- 15:58, 24 August 2017 diff hist +29 BamUtil: stats →BaseQC (--pBaseQC and --cBaseQC and --baseSum)
- 15:57, 24 August 2017 diff hist +479 BamUtil: stats →Parameters
- 04:20, 14 June 2017 diff hist +30 VerifyBamID →Column information in the output files
- 15:42, 4 January 2017 diff hist +261 Nm User talk:Gzajac Welcome! current
- 15:42, 4 January 2017 diff hist +334 Nm User:Gzajac Creating user page for new user. current
- 22:30, 14 April 2016 diff hist +36 BamUtil: dedup →Implementation Notes
- 01:45, 6 March 2016 diff hist +26 BamUtil: gapInfo →Rules current
- 01:10, 6 March 2016 diff hist +1,246 BamUtil: recab →Parameters
- 01:07, 6 March 2016 diff hist -22 BamUtil: recab →Skip Records with any of the Specified Flags (--buildExcludeFlags, --applyExcludeFlags)
- 00:45, 6 March 2016 diff hist -109 BamUtil: dedup →Skip Records with any of the Specified Flags (--excludeFlags)
- 00:20, 6 March 2016 diff hist +143 BamUtil: dedup →Skip Records with any of the Specified Flags (--excludeFlags)
- 00:15, 6 March 2016 diff hist +43 BamUtil: dedup →Parameters
- 00:01, 6 March 2016 diff hist +95 BamUtil: clipOverlap →ASSUMPTIONS/RESTRICTIONS current
- 00:00, 6 March 2016 diff hist 0 BamUtil: clipOverlap →Parameters
- 23:59, 5 March 2016 diff hist -29 BamUtil: clipOverlap →Skip Records with any of the Specified Flags (--excludeFlags)
- 23:53, 5 March 2016 diff hist +1,936 BamUtil: bam2FastQ →Parameters current
- 23:36, 5 March 2016 diff hist +102 BamUtil: bam2FastQ →Usage
- 23:35, 5 March 2016 diff hist -100 BamUtil: bam2FastQ →Overview of the bam2FastQ function of bamUtil
- 18:39, 28 January 2016 diff hist +257 GotCloud: Alignment Pipeline →Optional Configurable Settings current
- 23:00, 28 October 2015 diff hist -136 Releasing GotCloud
- 15:00, 19 August 2015 diff hist +261 Nm User talk:Pjvh Welcome! current
- 15:00, 19 August 2015 diff hist +445 Nm User:Pjvh Creating user page for new user.
- 14:56, 30 June 2015 diff hist +78 GotCloud: Creating a New Pipeline →Example Pipelines Created
- 14:51, 30 June 2015 diff hist +163 GotCloud: Creating a New Pipeline →Overall Pipeline Definition
- 14:50, 30 June 2015 diff hist 0 GotCloud: Creating a New Pipeline →Defining a New Pipeline
- 14:50, 30 June 2015 diff hist +2,508 GotCloud: Creating a New Pipeline
- 14:12, 30 June 2015 diff hist +3,041 GotCloud: Creating a New Pipeline →Configure Each Step
- 13:08, 30 June 2015 diff hist +1,180 GotCloud: Creating a New Pipeline →Defining a New Pipeline
- 10:54, 23 June 2015 diff hist +921 GotCloud: FAQs →Variant Calling Pipeline FAQs current
- 12:52, 26 May 2015 diff hist +473 GotCloud
- 12:10, 22 May 2015 diff hist -12 SeqShop: Calling Your Own Genome, May 2015 →Annotation / Lookup against dbSNP current
- 10:49, 22 May 2015 diff hist +143 SeqShop: Calling Your Own Genome, May 2015 →Friday
- 10:40, 22 May 2015 diff hist +30 SeqShop: May 2015 current
- 10:40, 22 May 2015 diff hist 0 N File:2015.05 - Workshop Closing.pdf current
- 09:44, 22 May 2015 diff hist -304 SeqShop: Calling Your Own Genome, May 2015
- 16:29, 21 May 2015 diff hist +12 SeqShop: Calling Your Own Genome, May 2015 →FEEDBACK!
- 14:57, 21 May 2015 diff hist +18 SeqShop: Ancestry On Your Own Genome, May 2015 →Visualizing Ancestry current
- 14:56, 21 May 2015 diff hist +6 SeqShop: Ancestry On Your Own Genome, May 2015 →Estimate ancestry
- 14:52, 21 May 2015 diff hist +1 SeqShop: Ancestry On Your Own Genome, May 2015 →Visualizing Ancestry
- 14:26, 21 May 2015 diff hist +30 SeqShop: Ancestry On Your Own Genome, May 2015 →Estimate ancestry
- 14:25, 21 May 2015 diff hist +5 SeqShop: Ancestry On Your Own Genome, May 2015 →Visualizing Ancestry
- 14:25, 21 May 2015 diff hist +10 SeqShop: Ancestry On Your Own Genome, May 2015 →Estimate ancestry
- 14:24, 21 May 2015 diff hist +5 SeqShop: Ancestry On Your Own Genome, May 2015 →Step 2: pileup --> seq
- 14:24, 21 May 2015 diff hist +6 SeqShop: Ancestry On Your Own Genome, May 2015 →Setup your terminal
- 14:22, 21 May 2015 diff hist -34 SeqShop: Ancestry On Your Own Genome, May 2015 →Step 1: bam --> pileup
- 14:15, 21 May 2015 diff hist 0 SeqShop: Association Analysis, May 2015 →Download & Build EPACTS current
- 14:14, 21 May 2015 diff hist +14 SeqShop: Association Analysis, May 2015 →Setup
- 14:13, 21 May 2015 diff hist +218 SeqShop: Association Analysis, May 2015 →Setup
- 14:04, 21 May 2015 diff hist +340 SeqShop: Association Analysis, May 2015
- 10:22, 21 May 2015 diff hist +5 SeqShop: Ancestry On Your Own Genome, May 2015 →Step 1: bam --> pileup