User contributions
From Genome Analysis Wiki
- 16:36, 1 March 2017 (diff | hist) . . (+466) . . Help:Contents (current)
- 15:29, 1 March 2017 (diff | hist) . . (-53) . . Minimac
- 15:29, 1 March 2017 (diff | hist) . . (+1) . . Minimac
- 15:28, 1 March 2017 (diff | hist) . . (+53) . . Minimac
- 18:37, 26 October 2016 (diff | hist) . . (-1) . . Abecasis Lab (→Staff)
- 18:37, 26 October 2016 (diff | hist) . . (0) . . N File:Pjvh.jpg (current)
- 21:46, 28 July 2016 (diff | hist) . . (+24) . . CSG Tech Talks
- 21:45, 28 July 2016 (diff | hist) . . (0) . . N File:Cplusplus11-features-and-tricks.pdf (current)
- 16:40, 1 April 2016 (diff | hist) . . (+44) . . Talk:GotCloud (current)
- 15:24, 12 January 2016 (diff | hist) . . (+12) . . Talk:GotCloud (→Organization of the GotCloud pages on this wiki)
- 11:51, 12 January 2016 (diff | hist) . . (+54) . . Using Gotcloud on Flux (→Next, prepare to use the Flux/Torque/PBS cluster) (current)
- 02:54, 8 January 2016 (diff | hist) . . (+215) . . Using Gotcloud on Flux (→How to monitor your jobs on Flux)
- 02:53, 8 January 2016 (diff | hist) . . (+241) . . Using Gotcloud on Flux (→How to run Gotcloud on Flux)
- 02:43, 8 January 2016 (diff | hist) . . (+973) . . Using Gotcloud on Flux (→Running Gotcloud on Flux)
- 02:33, 8 January 2016 (diff | hist) . . (+33) . . Using Gotcloud on Flux (→Next, prepare to use the Flux/Torque/PBS cluster)
- 02:33, 8 January 2016 (diff | hist) . . (+1) . . Using Gotcloud on Flux (→Next, prepare to use the Flux/Torque/PBS cluster)
- 02:32, 8 January 2016 (diff | hist) . . (+766) . . Using Gotcloud on Flux (→Next, prepare to use the Flux/Torque/PBS cluster)
- 02:14, 8 January 2016 (diff | hist) . . (-33) . . Using Gotcloud on Flux (→Next, prepare to use the Flux/Torque/PBS cluster)
- 02:14, 8 January 2016 (diff | hist) . . (+3,382) . . N Using Gotcloud on Flux (Created page with "__TOC__ ==Running Gotcloud on Flux== ===First, Configure GotCloud like you would anywhere else=== 1. Install GotCloud somewhere as instructed GotCloud#GotCloud_Setup_on_A...")
- 00:25, 8 January 2016 (diff | hist) . . (+40) . . Talk:GotCloud
- 00:22, 8 January 2016 (diff | hist) . . (-1) . . Talk:GotCloud (→Organization of the GotCloud pages on this wiki)
- 00:21, 8 January 2016 (diff | hist) . . (+51) . . Talk:GotCloud
- 00:19, 8 January 2016 (diff | hist) . . (-626) . . Talk:GotCloud
- 00:17, 8 January 2016 (diff | hist) . . (+1,287) . . Talk:GotCloud
- 23:49, 7 January 2016 (diff | hist) . . (+339) . . Talk:GotCloud
- 23:42, 7 January 2016 (diff | hist) . . (+1,799) . . N Talk:GotCloud (Created page with "==Organization of the GotCloud pages on this wiki== The main page is http://genome.sph.umich.edu/wiki/GotCloud . Setup pages: * http://genome.sph.umich.edu/wiki/GotCloud:_Bi...")
- 23:29, 7 January 2016 (diff | hist) . . (+25) . . GotCloud: Binary Releases (current)
- 23:27, 7 January 2016 (diff | hist) . . (+9) . . GotCloud: Binary Releases (→GotCloud Binary Releases)
- 23:25, 7 January 2016 (diff | hist) . . (+12) . . GotCloud: Binary Releases
- 18:09, 15 December 2015 (diff | hist) . . (+16) . . GotCloud (→GotCloud Setup)
- 22:17, 6 November 2015 (diff | hist) . . (-124) . . Releasing GotCloud (current)
- 01:51, 31 October 2015 (diff | hist) . . (-2) . . VcfCooker (current)
- 01:50, 31 October 2015 (diff | hist) . . (+74) . . VcfCooker (add download link)
- 03:53, 29 October 2015 (diff | hist) . . (+8) . . Releasing GotCloud
- 03:40, 29 October 2015 (diff | hist) . . (+36) . . Releasing GotCloud
- 03:38, 29 October 2015 (diff | hist) . . (-2) . . Releasing GotCloud
- 03:34, 29 October 2015 (diff | hist) . . (-36) . . Releasing GotCloud
- 03:29, 29 October 2015 (diff | hist) . . (-2) . . Releasing GotCloud
- 18:11, 27 October 2015 (diff | hist) . . (+22) . . BamUtil: clipOverlap (→Overview of the clipOverlap function of bamUtil: grammar/usage.)
- 18:08, 27 October 2015 (diff | hist) . . (-13) . . m BamUtil: clipOverlap (→Overview of the clipOverlap function of bamUtil: Fix broken link.)
- 12:55, 2 October 2015 (diff | hist) . . (-65) . . Talk:SeqShop: Sequence Mapping and Assembly Practical, May 2015 (remove idea as impractical because of samtools, tabix, svtoolkit) (current)
- 13:09, 28 September 2015 (diff | hist) . . (+65) . . N Talk:SeqShop: Sequence Mapping and Assembly Practical, May 2015 (Created page with "TODO: put `gotcloud` into the path and remove the variable `$GC`.")
- 16:10, 11 September 2015 (diff | hist) . . (+33) . . m SAM (→What Information Does SAM/BAM Have for an Alignment: turn text to link) (current)
- 18:50, 8 September 2015 (diff | hist) . . (0) . . Git FAQs (→Bring in changes from a subtree's remote: It won't work if you only have the remote but not the branch.) (current)
- 18:04, 1 September 2015 (diff | hist) . . (-18) . . m Git FAQs (→Subtrees: Format code.)
- 18:01, 1 September 2015 (diff | hist) . . (+246) . . Git FAQs (→Subtrees: Format instructions for using git subtrees)
- 17:43, 1 September 2015 (diff | hist) . . (-77) . . GotCloud (→Running GotCloud Software: Remove broken links. Update pipeline status.)
- 14:55, 31 August 2015 (diff | hist) . . (+7) . . GotCloud: Creating a New Pipeline (→Command Line Parameters: fix formatting about BAM_LIST) (current)
- 14:28, 31 August 2015 (diff | hist) . . (0) . . m GotCloud: Creating a New Pipeline (→Overall Pipeline Definition: spelling)
- 13:55, 31 August 2015 (diff | hist) . . (+1) . . m GotCloud: Amazon (matching parenthesis) (current)
- 16:37, 25 August 2015 (diff | hist) . . (0) . . m SeqShop: Estimates of Genetic Ancestry Practical, May 2015 (→Step 1: bam --> pileup: add # to command line)
- 15:56, 25 August 2015 (diff | hist) . . (-173) . . SeqShop: Analysis of Structural Variation Practical, May 2015 (Undo revision 13683 by Pjvh (talk) revert all changes involving `--list bam.list`) (current)
- 18:34, 24 August 2015 (diff | hist) . . (+4) . . SeqShop: Analysis of Structural Variation Practical, May 2015 (→Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline: split long command line)
- 18:31, 24 August 2015 (diff | hist) . . (+21) . . SeqShop: Analysis of Structural Variation Practical, May 2015 (→Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline: add `--list bams/bam.list` to the 3rd command)
- 18:29, 24 August 2015 (diff | hist) . . (+21) . . SeqShop: Analysis of Structural Variation Practical, May 2015 (→Running GotCloud/GenomeSTRiP Genotyping Pipeline: add `--list bams/bam.list` to the next gotcloud command)
- 18:21, 24 August 2015 (diff | hist) . . (+1) . . m SeqShop: Analysis of Structural Variation Practical, May 2015 (→Running GotCloud/GenomeSTRiP Discovery Pipeline: add missing dash)
- 18:19, 24 August 2015 (diff | hist) . . (+127) . . SeqShop: Analysis of Structural Variation Practical, May 2015 (→Running GotCloud/GenomeSTRiP Discovery Pipeline: tell gotcloud where bam.list is, which is now required.)
- 22:06, 19 August 2015 (diff | hist) . . (+31) . . User:Pjvh (current)
- 22:05, 19 August 2015 (diff | hist) . . (-445) . . User:Pjvh (Blanked the page)
- 18:35, 19 August 2015 (diff | hist) . . (+4) . . SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015 (→Filtered VCF: since the uncompressed vcf isn't created, use zless on the compressed) (current)
- 15:05, 19 August 2015 (diff | hist) . . (+6) . . SeqShop: Sequence Mapping and Assembly Practical, May 2015 (→Download & Build GotCloud: update to gotcloud-1.17.4)
