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Jump to navigationJump to search- 00:31, 12 May 2016 diff hist +208 Rvtests current
- 18:33, 15 July 2015 diff hist -40 LiftOver →Resources current
- 22:37, 24 March 2015 diff hist -254 RareMETALS →A Simple Tutorial for Using the rareMETALS.range function
- 22:16, 24 March 2015 diff hist +33 RareMETALS
- 22:59, 13 January 2015 diff hist +57 RvTests current
- 22:57, 13 January 2015 diff hist -1,854 Rvtests
- 15:43, 12 January 2015 diff hist +7,561 Rvtests
- 01:40, 14 October 2014 diff hist +182 LiftOver →Resources
- 14:53, 12 August 2014 diff hist +3,974 N Ancestry Created page with "= Introduction = Ancestry can infer ancestry using sequence reads in the Principal Component (PC) space. It is suited for targeted/exome sequencing or whole genome sequenci..." current
- 10:41, 10 July 2014 diff hist +155 LASER →Introduction
- 11:12, 14 February 2014 diff hist +262 LiftOver →Resources
- 18:21, 29 January 2014 diff hist +97 RvTests
- 18:11, 29 January 2014 diff hist +6,391 N Template:Other uses Created page with "<!-- BANNER ACROSS TOP OF PAGE --> {| id="mp-topbanner" style="width:100%; background:#f9f9f9; margin:1.2em 0 6px 0; border:1px solid #ddd;" | style="width:61%; ..." current
- 18:11, 29 January 2014 diff hist +6,391 N Template:Main Created page with "<!-- BANNER ACROSS TOP OF PAGE --> {| id="mp-topbanner" style="width:100%; background:#f9f9f9; margin:1.2em 0 6px 0; border:1px solid #ddd;" | style="width:61%; ..." current
- 18:05, 29 January 2014 diff hist +6,391 N Template:Documentation/docspace Created page with "<!-- BANNER ACROSS TOP OF PAGE --> {| id="mp-topbanner" style="width:100%; background:#f9f9f9; margin:1.2em 0 6px 0; border:1px solid #ddd;" | style="width:61%; ..." current
- 18:04, 29 January 2014 diff hist +6,391 N Template:Documentation/template page Created page with "<!-- BANNER ACROSS TOP OF PAGE --> {| id="mp-topbanner" style="width:100%; background:#f9f9f9; margin:1.2em 0 6px 0; border:1px solid #ddd;" | style="width:61%; ..." current
- 18:03, 29 January 2014 diff hist +6,391 N Template:Documentation/end box Created page with "<!-- BANNER ACROSS TOP OF PAGE --> {| id="mp-topbanner" style="width:100%; background:#f9f9f9; margin:1.2em 0 6px 0; border:1px solid #ddd;" | style="width:61%; ..." current
- 18:02, 29 January 2014 diff hist +11,288 N Template:Pp-meta Created page with "{{#ifeq:{{#switch:{{lc:{{{type}}}}} |move=<!-- -->{{#ifeq: {{#switch:{{lc:{{{demolevel|undefined}}}}} |semi |autoconfirmed = autoconfirmed |..." current
- 18:02, 29 January 2014 diff hist +1,092 N Template:Documentation/end box2 Created page with "<noinclude><div></noinclude><div style="clear: both;"></div><!--So right or left floating items don't stick out of the doc box.--> </div><!--End of green doc box--><!-- Link..." current
- 18:01, 29 January 2014 diff hist +3,563 N Template:Pp-template Created page with "<includeonly>{{pp-meta |type={{#switch:{{{demolevel|{{#ifeq:{{PROTECTIONLEVEL:edit}}-{{PROTECTIONLEVEL:move}}|-sysop|move|{{PROTECTIONLEVEL:edit}}}}}}} |semi |autoconfir..." current
- 18:01, 29 January 2014 diff hist +1,960 N Template:Documentation/start box Created page with "<!-- Start of green doc box --><div id="template-documentation" class="template-documentation iezoomfix"><!-- Add the heading at the top of the doc box: -->{{#ifeq: {{{hea..." current
- 17:56, 29 January 2014 diff hist +641 N Template:Documentation/start box2 Created page with "{{documentation/start box | preload = {{{preload|}}} <!--Allow custom preloads--> | heading = {{{heading|¬}}} <!--Empty but defined means no header--> | heading-style = {..." current
- 17:56, 29 January 2014 diff hist +435 N Template:Template other Created page with "{{#switch: <!--If no or empty "demospace" parameter then detect namespace--> {{#if:{{{demospace|}}} | {{lc: {{{demospace}}} }} <!--Use lower case "demospace"--> | {..." current
- 17:52, 29 January 2014 diff hist +117 N Template:Str left Created page with "<includeonly>{{ {{{|safesubst:}}}padleft:|{{{2|1}}}|{{{1}}}}}</includeonly><noinclude> {{documentation}} </noinclude>" current
- 17:51, 29 January 2014 diff hist +151 N Template:Namespace detect Created page with "{{#invoke:Namespace detect|main}}<noinclude> {{documentation}} <!-- Categories go on the /doc subpage, and interwikis go on Wikidata. --> </noinclude>" current
- 17:49, 29 January 2014 diff hist +2,382 N Template:Documentation Created page with "<!-- Automatically add {{template sandbox notice}} when on a /sandbox page. -->{{#ifeq: {{SUBPAGENAME}} | sandbox | <div style="clear: both;"></div>{{template sandbox notice..." current
- 17:48, 29 January 2014 diff hist +76 N Template:Hatnote Created page with "<div class="dablink">{{{1}}}</div><noinclude> {{documentation}} </noinclude>" current
- 17:47, 29 January 2014 diff hist +1,526 N Template:About Created page with "{{Hatnote|<!-- -->{{#if: {{{1|}}}|<!-- -->This {{namespace detect|main=article|category=category|other=page}} is about {{{1}}}. }}<!-- -->For {{#if:{{{2|}}}|{{{2}}}..." current
- 13:27, 26 November 2013 diff hist +108 N Talk:RAREMETAL Created page with "Xiaowei: It's necessary to include a wiki to explain software outputs, especially for people outside of CSG." current
- 13:25, 26 November 2013 diff hist +118 RAREMETAL Undo revision 9044 by Shuang Feng (talk)
- 13:12, 26 November 2013 diff hist +118 RAREMETAL Undo revision 9041 by Shuang Feng (talk)
- 12:35, 26 November 2013 diff hist +119 RAREMETAL
- 12:33, 26 November 2013 diff hist +78 N Summary Files Specification for RAREMETAL Zhanxw moved page Summary Files Specification for RAREMETAL to Summary Statistics Files Specification for RAREMETAL and rvtests current
- 12:33, 26 November 2013 diff hist 0 m Summary Statistics Files Specification for RAREMETAL and rvtests Zhanxw moved page Summary Files Specification for RAREMETAL to Summary Statistics Files Specification for RAREMETAL and rvtests
- 21:43, 25 November 2013 diff hist +96 RAREMETAL Undo revision 9010 by Shuang Feng (talk)
- 01:25, 24 November 2013 diff hist +29 Summary Statistics Files Specification for RAREMETAL and rvtests
- 01:24, 24 November 2013 diff hist +132 Summary Statistics Files Specification for RAREMETAL and rvtests
- 01:17, 24 November 2013 diff hist +7,748 N Summary Statistics Files Specification for RAREMETAL and rvtests Created page with "Category:Software RAREMETAL use summary statistics files to perform meta-analysis. These includes (1) score statistics file and (2) covariance file. Both RAREMETALWORKE..."
- 00:38, 24 November 2013 diff hist +96 RAREMETAL →Useful Wiki Pages
- 00:34, 24 November 2013 diff hist +122 RAREMETAL →Related Programs
- 12:38, 23 November 2013 diff hist +66 CheckVCF.py →checkVCF.py
- 02:21, 15 November 2013 diff hist +2,611 LASER →Estimate ancestries of sequence samples
- 02:20, 15 November 2013 diff hist 0 N File:LASER paper Figure 2.png current
- 00:34, 15 November 2013 diff hist +207 LASER →Geno file
- 09:59, 10 October 2013 diff hist +64 RAREMETAL Documentation
- 14:52, 9 October 2013 diff hist +45 RAREMETAL Documentation →Summary Statistics
- 14:50, 9 October 2013 diff hist -59 RAREMETAL Documentation →Prepare Input Files
- 14:50, 9 October 2013 diff hist +705 RAREMETAL Documentation
- 14:09, 29 June 2013 diff hist 0 QPLOT
- 14:39, 20 June 2013 diff hist -2 Xiaowei Zhan
- 14:37, 20 June 2013 diff hist 0 N File:Tux flying.gif current
- 14:31, 20 June 2013 diff hist +236 N Xiaowei Zhan Created page with '<span style="line-height: 1.5em;">Xiaowei Zhan is a PhD student in Abecasis lab.</span> Some software he has been working on (click [http://genome.sph.umich.edu/w/index.ph…'
- 16:30, 19 June 2013 diff hist +460 QPLOT
- 22:47, 29 May 2013 diff hist +5 RAREMETAL Documentation →List of Studies
- 22:46, 29 May 2013 diff hist +55 RAREMETAL Documentation →Software User Interface
- 23:06, 28 May 2013 diff hist +2 RAREMETAL Documentation
- 23:05, 28 May 2013 diff hist +225 RAREMETAL Documentation
- 00:56, 9 May 2013 diff hist +953 N How to use aspera Created page with '== Introduction to Aspera == Aspera is a faster download tool than ftp/sftp. If you download large sequencing data (e.g. 1000 Genomes Project data), you should consider use Aspe…' current
- 21:55, 31 March 2013 diff hist +13,918 N TabAnno Created page with '= Introduction = TabAnno is short for "annotation", it is used for annotate variants. Our goal is to provide abundant information for genetic variants promptly. For example, ann…'
- 21:45, 31 March 2013 diff hist +21 Main Page
- 21:37, 31 March 2013 diff hist +23 Main Page
- 21:35, 31 March 2013 diff hist +27 Main Page
- 21:32, 31 March 2013 diff hist -23 Main Page
- 21:31, 31 March 2013 diff hist +50 N Rare-metal-worker Created page with 'http://genome.sph.umich.edu/wiki/Rare-Metal-Worker' current
- 21:30, 31 March 2013 diff hist +200 Main Page
- 16:23, 27 March 2013 diff hist -1 RareMETALS
- 16:23, 27 March 2013 diff hist +107 RareMETALS
- 12:39, 27 March 2013 diff hist -40 RareMETALS
- 08:42, 27 March 2013 diff hist +49 RareMETALS →Where to download
- 08:24, 27 March 2013 diff hist +553 RareMETALS
- 08:14, 27 March 2013 diff hist -5 RareMETALS
- 08:14, 27 March 2013 diff hist +3 RareMETALS
- 08:04, 27 March 2013 diff hist +141 RareMETALS
- 20:36, 26 March 2013 diff hist +61 Main Page →Sequence Analysis Tools
- 20:31, 26 March 2013 diff hist 0 N File:RefFlat hg19.txt.gz current
- 20:30, 26 March 2013 diff hist 0 N File:RareMETALS 2.4.tar.gz current
- 20:29, 26 March 2013 diff hist +5,408 N RareMETALS Created page with 'rareMETALS is an R-package for performing single or gene-level tests for detecting rare variant associations. For questions regarding the use of this package, please contact Daji…'
- 22:06, 6 March 2013 diff hist +59 N RareMetals Created page with 'Documentation of how to perform rare variant meta analysis.' current
- 16:21, 4 March 2013 diff hist -1 Tutorial: GotCloud →STEP 3 : Run GotCloud Variant Calling Pipeline
- 20:49, 2 March 2013 diff hist +23,807 N Rvtests Created page with ''''Table of Contents''' <!--*generated with [DocToc](http://doctoc.herokuapp.com/)*--> * Introduction * Download * [[#quick-tutorial|Quick Tutori…'
- 17:23, 23 February 2013 diff hist +22 CheckVCF.py
- 17:11, 23 February 2013 diff hist +4,011 N CheckVCF.py Created page with '= checkVCF.py = checkVCF.py is a small tools written in Python script to check input [http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-ve…'
- 17:21, 19 February 2013 diff hist +191 LASER →Geno file
- 17:01, 19 February 2013 diff hist +2,723 N Vcf2geno Created page with '= vcf2geno = Convert VCF files to genotype file and site file. == Input File == Vcf2geno takes VCF files. They can be in plain text or GZIP/BGZIP compressed formats. == Outpu…' current
- 14:48, 4 February 2013 diff hist +1 LASER →Pileup file
- 14:46, 4 February 2013 diff hist +394 LASER →Process sequencing file (BAM)
- 14:38, 4 February 2013 diff hist +2 LASER →Workflow
- 14:36, 4 February 2013 diff hist +1 LASER →Workflow
- 17:35, 2 February 2013 diff hist +458 LASER
- 22:02, 1 February 2013 diff hist +45 LASER →Workflow
- 21:42, 1 February 2013 diff hist +2 LASER
- 21:41, 1 February 2013 diff hist +1 LASER
- 21:07, 1 February 2013 diff hist +5 LASER →Obtain LASER
- 21:00, 1 February 2013 diff hist +158 LASER
- 10:01, 1 February 2013 diff hist 0 File:LASER-DataProcessing.png uploaded a new version of "File:LASER-DataProcessing.png" current
- 23:21, 30 January 2013 diff hist +24 N Talk:LASER Manual moved Talk:LASER Manual to Talk:LASER: suggested by wcl current
- 23:21, 30 January 2013 diff hist 0 m Talk:LASER moved Talk:LASER Manual to Talk:LASER: suggested by wcl current
- 23:21, 30 January 2013 diff hist +19 N LASER Manual moved LASER Manual to LASER: suggested by wcl current
- 23:21, 30 January 2013 diff hist 0 m LASER moved LASER Manual to LASER: suggested by wcl
- 23:09, 30 January 2013 diff hist +1 LASER
