All public logs
From Genome Analysis Wiki
Jump to navigationJump to searchCombined display of all available logs of Genome Analysis Wiki. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).
(newest | oldest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)- 09:43, 8 November 2017 Goncalo talk contribs uploaded File:666.2017.12 - Kinship Coefficients.pdf
- 08:59, 1 November 2017 Goncalo talk contribs uploaded a new version of File:666.2010.01 - Power of Genomewide Studies.pdf
- 04:26, 1 November 2017 Goncalo talk contribs uploaded File:666.2010.01 - Power of Genomewide Studies.pdf
- 08:10, 23 October 2017 Goncalo talk contribs uploaded File:666.Worksheet 4.pdf
- 08:03, 23 October 2017 Goncalo talk contribs uploaded File:666.Worksheet 3.Solution.pdf
- 08:03, 23 October 2017 Goncalo talk contribs uploaded File:666.Worksheet 2.Solution.pdf
- 08:02, 23 October 2017 Goncalo talk contribs uploaded File:666.Worksheet 1.Solution.pdf
- 02:19, 23 October 2017 Goncalo talk contribs deleted page 666 Problem Set 1 (content was: "= Question 1: Sex difference in allele frequencies = Consider a population where allele frequencies differ between the sexes. Focus...", and the only contributor was "Goncalo" (talk))
- 02:09, 23 October 2017 Goncalo talk contribs restored page 666 Problem Set 1 (1 revision restored)
- 08:49, 11 October 2017 Goncalo talk contribs uploaded File:666.2017.10 - Advanced Haplotyping.pdf
- 08:36, 9 October 2017 Goncalo talk contribs uploaded File:666.2017.09 - Haplotype Estimation.pdf
- 08:33, 4 October 2017 Goncalo talk contribs uploaded File:666.SampleMidterm.pdf
- 07:10, 4 October 2017 Goncalo talk contribs uploaded File:666.2017.08 - The E-M Algorithm.pdf
- 07:08, 4 October 2017 Goncalo talk contribs uploaded File:666.Worksheet 3.pdf
- 06:48, 2 October 2017 Goncalo talk contribs uploaded File:666.2017.07 - Maximum Likelihood Estimation.pdf
- 08:24, 27 September 2017 Goncalo talk contribs uploaded File:666.2017.06 - More Advanced Coalescent Models.pdf
- 08:23, 27 September 2017 Goncalo talk contribs uploaded a new version of File:666.Worksheet 2.pdf
- 08:23, 27 September 2017 Goncalo talk contribs uploaded File:666.Worksheet 2.pdf
- 08:25, 25 September 2017 Goncalo talk contribs uploaded File:666.2017.05 - Coalescent and Allele Counts.pdf
- 05:53, 18 September 2017 Goncalo talk contribs uploaded File:666.04 - The Coalescent.pdf
- 07:57, 13 September 2017 Goncalo talk contribs uploaded File:666.Worksheet 1.pdf
- 07:51, 13 September 2017 Goncalo talk contribs uploaded File:666.2017.03 - Linkage Disequilibrium.pdf
- 08:32, 11 September 2017 Goncalo talk contribs uploaded File:666.2017.01 - Introductory Lecture.pdf
- 04:44, 11 September 2017 Goncalo talk contribs uploaded File:666.2017.02 - Hardy Weinberg Equilibrium.pdf
- 08:39, 11 April 2017 Goncalo talk contribs uploaded File:2017.04 - Adventures in Human Genetics.pdf
- 08:10, 25 March 2017 Goncalo talk contribs uploaded File:Question Sheet - 2017 - Liu et al (2013) Nature Genetics.pdf
- 08:07, 25 March 2017 Goncalo talk contribs uploaded File:Question Sheet - 2017 - Wu et al (2011) American Journal of Human Genetics.pdf
- 19:10, 19 March 2017 Goncalo talk contribs uploaded File:Question Sheet - 2017 - Kang et al (2010) Nature Genetics .pdf (Introduction to linear mixed models for GWAS.)
- 10:50, 30 January 2017 Goncalo talk contribs uploaded File:Question Sheet - Boehnke and Cox (1997) AJHG.pdf
- 09:58, 25 January 2017 Goncalo talk contribs uploaded File:01. Genotype Imputation.pdf
- 09:58, 25 January 2017 Goncalo talk contribs uploaded File:00. Warm-up to Genomewide Analyses.pdf
- 09:35, 19 January 2017 Goncalo talk contribs uploaded File:866 - Slides for Hyun.pdf
- 09:04, 19 January 2017 Goncalo talk contribs uploaded File:Question Sheet - Delaneau et al (2013) Nature Methods.pdf
- 11:12, 28 January 2016 Goncalo talk contribs uploaded File:Chr20.1000G.EUR.330k.vcf.gz
- 13:05, 12 December 2014 Goncalo talk contribs uploaded File:2014.12 - Workshop Closing.pdf
- 05:27, 8 December 2014 Goncalo talk contribs uploaded File:2014.12 - Workshop Introduction.pdf
- 05:16, 8 December 2014 Goncalo talk contribs uploaded File:Question Sheet - Kang et al (2010) Nature Genetics.pdf
- 14:44, 3 December 2014 Goncalo talk contribs deleted page RareMETAL Quick Start (content was: "to be constructed ..." (and the only contributor was "Shuang Feng"))
- 14:43, 3 December 2014 Goncalo talk contribs deleted page Please Delete This Page (content before blanking was: "")
- 03:41, 1 December 2014 Goncalo talk contribs uploaded a new version of File:Question Sheet - Liu et al (2013) Nature Genetics.pdf (Update with volume and page numbers.)
- 04:28, 24 November 2014 Goncalo talk contribs uploaded File:Question Sheet - Kircher et al (2014) Nature Genetics.pdf
- 04:27, 24 November 2014 Goncalo talk contribs uploaded File:Question Sheet - Albers et al (2010) Genome Research.pdf
- 19:29, 26 October 2014 Goncalo talk contribs uploaded a new version of File:Question Sheet - Iqbal et al (2012) Nature Genetics.pdf (Removed dependency on Zerbino and Birney (Velvet) paper, so as to allow more flexibility in scheduling.)
- 21:09, 18 September 2014 Goncalo talk contribs uploaded File:Question Sheet - Menelaou et al (2013) Bioinformatics.pdf
- 11:01, 20 June 2014 Goncalo talk contribs uploaded File:2014.06 - Workshop Closing.pdf
- 05:30, 16 June 2014 Goncalo talk contribs uploaded File:2014.06 - Abecasis Workshop Introduction.pdf
- 16:08, 6 December 2013 Goncalo talk contribs uploaded File:Question Sheet - Jun et al (2012) American Journal of Human Genetics.pdf
- 13:29, 4 December 2013 Goncalo talk contribs uploaded File:Question Sheet - Wu et al (2011) American Journal of Human Genetics.pdf
- 17:55, 26 November 2013 Goncalo talk contribs uploaded File:Question Sheet - Liu et al (2013) Nature Genetics.pdf
- 16:01, 25 November 2013 Goncalo talk contribs uploaded File:Question Sheet - Li and Durbin (2011) Nature.pdf
- 16:09, 12 November 2013 Goncalo talk contribs uploaded File:Question Sheet - Iqbal et al (2012) Nature Genetics.pdf
- 04:00, 7 November 2013 Goncalo talk contribs uploaded a new version of File:Question Sheet - Zerbino and Birney (2008) Bioinformatics.pdf (Removed unnecessary second page.)
- 03:58, 7 November 2013 Goncalo talk contribs uploaded a new version of File:Question Sheet - Li and Durbin (2009) Bioinformatics.pdf (Fixed typos in code example.)
- 03:57, 7 November 2013 Goncalo talk contribs uploaded File:Question Sheet - Zerbino and Birney (2008) Bioinformatics.pdf
- 12:19, 30 October 2013 Goncalo talk contribs uploaded File:Question Sheet - Li and Durbin (2009) Bioinformatics.pdf
- 13:53, 28 October 2013 Goncalo talk contribs moved page 830 - BestAlignment::ClearCache() to 830 - BestAlignment::ClearPositions()
- 05:10, 11 October 2013 Goncalo talk contribs uploaded File:Question Sheet - Li et al (2008) Genome Research.pdf
- 11:13, 3 October 2013 Goncalo talk contribs moved page RAREMETAL-SOFTWARE to Rare Variant Analysis and Meta-Analysis
- 14:31, 2 October 2013 Goncalo talk contribs moved page 830 - Haplotyper::ScoreLeftConditional smart() to 830 - Haplotyper::ScoreLeftConditional() (smart, complicated) (Consistency.)
- 14:33, 25 September 2013 Goncalo talk contribs uploaded File:Question Sheet - Li et al (2010) Gen Epid.pdf
- 14:32, 25 September 2013 Goncalo talk contribs uploaded File:Question Sheet - Howie et al (2012) Nat Genet.pdf
- 14:29, 25 September 2013 Goncalo talk contribs uploaded File:Question Sheet - Browing and Browning (2012) Am J Hum Genet.pdf
- 12:07, 2 August 2013 Goncalo talk contribs uploaded File:2013.07 - Overton Award Final.pdf
- 15:20, 12 June 2013 Goncalo talk contribs uploaded File:Scott Vrieze.jpg
- 10:08, 8 March 2013 User account Dajiang Liu talk contribs was created by Goncalo talk contribs
- 10:07, 8 March 2013 Goncalo talk contribs deleted page File:Raremetalworker.tutorial.tgz (not ready for external distribution)
- 10:07, 8 March 2013 Goncalo talk contribs deleted page File:Raremetal.tutorial.tgz (not ready for external distribution)
- 15:20, 9 January 2013 Goncalo talk contribs uploaded File:Sample-manhattan-plot-B.png
- 15:20, 9 January 2013 Goncalo talk contribs uploaded File:Sample-manhattan-plot-A.png
- 15:19, 9 January 2013 Goncalo talk contribs uploaded File:Sample-manhattan-plot.png
- 17:06, 21 December 2012 User account Chaolong Wang talk contribs was created by Goncalo talk contribs
- 09:19, 5 December 2012 Goncalo talk contribs uploaded a new version of File:666.24.pdf (Minor tweaks)
- 05:22, 3 December 2012 Goncalo talk contribs uploaded a new version of File:666.20.pdf (This version adds a tiny bit more detail on the use of empirical kinship coefficients. )
- 04:43, 3 December 2012 Goncalo talk contribs uploaded a new version of File:666.2012.01.pdf (Added discussion of Lander Waterman results on contig lengths.)
- 14:58, 28 November 2012 Goncalo talk contribs uploaded a new version of File:666.2011.01.pdf (Typo fixes.)
- 09:28, 28 November 2012 Goncalo talk contribs uploaded a new version of File:666.2011.01.pdf (Minor updates (for consistency with new preceding lectures); added references for variable threshold test.)
- 09:37, 26 November 2012 Goncalo talk contribs uploaded File:666.2012.01.pdf (Version zero!)
- 02:07, 21 November 2012 Goncalo talk contribs uploaded a new version of File:666.2011.02.pdf (Minor update; added empirical distribution of read pair distances from QPLOT)
- 02:06, 21 November 2012 Goncalo talk contribs uploaded a new version of File:666.2010.05.pdf (Minor typo fixes)
- 00:32, 14 November 2012 Goncalo talk contribs uploaded a new version of File:666.2010.04.pdf (Minor updates, adding Ion Torrent as a sequencing technology and adding some specific numbers to illustrate the scale of genetic variation that can be reached by sequencing.)
- 06:33, 12 November 2012 Goncalo talk contribs uploaded a new version of File:666.2010.03.pdf (Adds a summary slide.)
- 03:33, 31 October 2012 Goncalo talk contribs uploaded a new version of File:666.17.pdf
- 03:33, 31 October 2012 Goncalo talk contribs uploaded a new version of File:666.16.pdf (Minor typo fix.)
- 03:07, 29 October 2012 Goncalo talk contribs uploaded a new version of File:666.16.pdf (Fixed look of slides with equations.)
- 05:24, 22 October 2012 Goncalo talk contribs uploaded a new version of File:666.2010.02.pdf (Updated lecture to include example from an actual affected sibling pair study. The lecture is still far too long.)
- 06:16, 3 October 2012 Goncalo talk contribs uploaded a new version of File:666.12.pdf (Minor edits.)
- 02:25, 26 September 2012 Goncalo talk contribs uploaded a new version of File:666.10.pdf (Minor tweaks. Now explicitly mentions use of the E-M algorithm to estimate subpopulations and their frequencies or for calling genotype clusters.)
- 23:05, 18 September 2012 Goncalo talk contribs uploaded a new version of File:666.06.pdf
- 08:40, 10 September 2012 Goncalo talk contribs uploaded a new version of File:666.03.pdf (Minor updates.)
- 02:16, 5 September 2012 Goncalo talk contribs deleted page File:2011.666.01.pdf (Deleted old revision 20120905060704!2011.666.01.pdf)
- 02:15, 5 September 2012 Goncalo talk contribs uploaded a new version of File:2011.666.01.pdf (Yet more minor edits, this time listing potential group projects.)
- 02:07, 5 September 2012 Goncalo talk contribs uploaded a new version of File:2011.666.01.pdf (Minor update for 2012, adding more detail to HWE discussion, link to online class notes, and potential discussion of grading scheme)
- 02:02, 5 September 2012 Goncalo talk contribs uploaded a new version of File:2011.666.01.pdf
- 01:07, 5 September 2012 Goncalo talk contribs deleted page 666 Problem Set 6 (Delete old solutions before start of new term!)
- 01:06, 5 September 2012 Goncalo talk contribs deleted page 666 Problem Set 5 (Delete old solutions before start of new term!)
- 01:06, 5 September 2012 Goncalo talk contribs restored page Biostatistics 666: Main Page (85 revisions restored: Fixing accidental deletion.)
- 01:05, 5 September 2012 Goncalo talk contribs deleted page Biostatistics 666: Main Page (Delete old solutions before start of new term!)
- 01:05, 5 September 2012 Goncalo talk contribs deleted page 666 Problem Set 4 (Delete old solutions before start of new term!)
- 01:05, 5 September 2012 Goncalo talk contribs deleted page 666 Problem Set 3 (Delete old solutions before start of new term!)
- 01:04, 5 September 2012 Goncalo talk contribs deleted page 666 Problem Set 2 (Delete old solutions before start of new term!)