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RAREMETALWORKER command reference

65 bytes added, 12:08, 19 June 2014
List of Options
* The [[RAREMETAL_FAQ | '''FAQ''']]
==List of Options ==  Options: Input Files : --ped [], --dat [], --vcf [], --dosage, --noeof Output Files : --prefix [], --LDwindow [1000000], --zip, --thin, --labelHits VC Options : --vcX, --separateX Trait Options : --makeResiduals, --inverseNormal, --traitName [] Model Options : --recessive, --dominant Kinship Source : --kinPedigree, --kinGeno, --kinFile [], --kinxFile [], --kinSave Kinship Options : --kinMaf [0.05], --kinMiss [0.05] Chromosome X : --xLabel [X], --xStart [2699520], --xEnd [154931044], --maleLabel [1], --femaleLabel [2] others : --cpu [1], --kinOnly, --geneMap [../data/refFlat_hg19.txt] PhoneHome : --noPhoneHome, --phoneHomeThinning [100]
==Input Files==
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