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:  b. If all overlapping nucleotides  do not match, assign SNP if shorter allele is of length 1 and MNP if not.
 
:  b. If all overlapping nucleotides  do not match, assign SNP if shorter allele is of length 1 and MNP if not.
 
:      else assign CLUMPED
 
:      else assign CLUMPED
;4. Variant classification is the union of the classification of each allele.
+
;4. Variant classification is the union of the classifications of each allele.
 
;5. If all alleles are the same length, assign MNP to the entire variant.
 
;5. If all alleles are the same length, assign MNP to the entire variant.
  
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