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482 bytes added
, 19:45, 16 February 2015
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| ==Trait== | | ==Trait== |
| ===--inverseNormal=== | | ===--inverseNormal=== |
| + | [ON|OFF]: default is '''OFF'''; '''ON''' will inverse normalize (quantile normalize) traits before fitting variance component model or adjusting covariates (if requested by --useCovariates option). |
| ===--useCovariates=== | | ===--useCovariates=== |
| + | [ON|OFF]: default is '''OFF'''; '''ON''' will adjust any covariates saved in PED/DAT file (covariates are labeled with "C" in DAT file). |
| + | ===--traitName=== |
| + | [your.trait.name.in.string]: default is to analyze all traits saved in PED/DAT file (traits are labeled with "T" in DAT file). |