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RAREFY TUTORIAL

387 bytes added, 04:27, 17 February 2015
COMMAND
==COMMAND==
*Use the following command to RAREFY the sample for both trait-increasing and trait-decreasing variants. Although this sample includes only trait-increasing variant, in real world, we do not know if the sample contains trait-increasing variants or trait-decreasing variants or both.
rarefy --ped sim1.ped --dat sim1.dat --inverseNormal --traitIncreasing --traitDecreasing --prefix sim1
==OUTPUT==
2,004
edits