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, 09:58, 22 June 2015
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| Passed variants in intergenic regions or UTR : PASS&&INFO.ANNO=~'Intergenic|UTR' | | Passed variants in intergenic regions or UTR : PASS&&INFO.ANNO=~'Intergenic|UTR' |
− | Passed variants in intergenic regions or UTR ignoring case : PASS&&INFO.ANNO=~'(?i)Intergenic|UTR' | + | Passed variants in intergenic regions or UTR ignoring case : PASS&&INFO.ANNO=~'(?i)Intergenic|UTR' <br> |
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| pcre2's '(?i)Intergenic|UTR' is equivalent to PERL's '/intergenic|UTR/i' | | pcre2's '(?i)Intergenic|UTR' is equivalent to PERL's '/intergenic|UTR/i' |
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| Operations | | Operations |
− | ==,!=,=~,~,&&,||,&,|,+,-,*,/
| + | == : equivalence for strings and numbers |
| + | != : not equal |
| + | =~ : regular expression match for strings only |
| + | ~~ : not of =~. Is equivalent to is PERL's !~, this notation is used as BASH keeps interpreting ! for recalling commands from the history |
| + | ~ : logical not |
| + | && : logical and |
| + | || : logical or |
| + | & : bitwise and |
| + | | : bitwise or |
| + | + : add |
| + | - : subtract |
| + | * : multiply |
| + | / : divide |
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| The motivation in this case is because Indels are a heterogeneous set of variants and thus we usually examine them | | The motivation in this case is because Indels are a heterogeneous set of variants and thus we usually examine them |