# Changes

## Genotype Likelihood based Allele Frequency

, 09:36, 28 July 2015
Estimation of Genotype Frequencies without assuming HWE
\end{align}
[/itex]

where $n$ is the number of alleles. $\frac{n(n+1)}{2}$ is the number of genotypes possible for $n$ alleles. So we are simply starting with equal frequency estimate guesses for each genotype.
The E step equates the expectation of the genotype $G_{i,j}$ for individual k as:
1,102
edits