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267 bytes added
, 08:44, 18 August 2016
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| <div class=" mw-collapsible mw-collapsed"> | | <div class=" mw-collapsible mw-collapsed"> |
− | #tab lobstr.bcf | + | #converts in.bcf to tab format with selected INFO fields |
− | vt validate lobstr.bcf | + | vt info2tab in.bcf -v -t EX_RL,FZ_RL,MDUST,LOBSTR,VNTRSEEK,RMSK,EX_REPEAT_TRACT |
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| <div style="height:6em; overflow:auto; border: 2px solid #FFF"> | | <div style="height:6em; overflow:auto; border: 2px solid #FFF"> |
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| </div> | | </div> |
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− | CHROM POS REF ALT N_ALLELE EX_RL FZ_RL MDUST LOBSTR VNTRSEEK RMSK | + | CHROM POS REF ALT N_ALLELE EX_RL FZ_RL MDUST LOBSTR VNTRSEEK RMSK EX_REPEAT_TRACT_1 EX_REPEAT_TRACT_2 |
− | 20 17548608 A AC 2 13 1 1 0 0 | + | 20 17548608 A AC 2 2 13 1 1 0 0 17548608 17548608 |
− | 20 17548608 AAAAG A 4 13 1 1 0 0 | + | 20 17548608 AAAAG A 2 4 13 1 1 0 0 17548609 17548609 |
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| <div class="mw-collapsible-content"> | | <div class="mw-collapsible-content"> |