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, 12:32, 15 October 2010
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| samtools pileup -g -T 1 -f ref.fa my.bam > my.glf | | samtools pileup -g -T 1 -f ref.fa my.bam > my.glf |
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| + | Note: you will need the reference fasta file ref.fa to create glf file from bam file. |
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| == How to Run == | | == How to Run == |
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| == Important Filters == | | == Important Filters == |