Changes

     string  symbol;            "Standard gene symbol"

     string  symbol;            "Standard gene symbol"

      

      

     Note: the 11th field is a mandatory field for running vcfCodingSnps. In the genelists provided with the package, this field gives the standard gene symbols such as "APOE", "LDL-R" etc. If a genelist downloaded by you own that does not contain such a field, you can simply make the 11th field equal to the first field which is the gene name in a specific track by a syntax like

     Note: the 11th field is a mandatory field for running vcfCodingSnps. In the genelists provided with the package, this field gives the standard gene symbols such as "APOE", "LDL-R" etc.  

  If a genelist downloaded by you own that does not contain such a field, you can simply make the 11th field equal to the first field which is the gene name in a specific track by a syntax like

      

      

     awk `{FS="\t"; print $0"\t"$1 }` yourGenelist > yourNewGenelist

     awk `{FS="\t"; print $0"\t"$1 }` yourGenelist > yourNewGenelist