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186 bytes removed ,  02:17, 8 January 2013
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  UNIFORM_TARGET_BED = {CURRENT_DIR}/umake_test.bed
 
  UNIFORM_TARGET_BED = {CURRENT_DIR}/umake_test.bed
   −
where {CURRENT_DIR} is the absolute path to the directory that contains the index and bed files.  You may also want to change the name of the output folder:
+
where {CURRENT_DIR} is the absolute path to the directory that contains the index and bed files.   
 
  −
OUT_PREFIX = {output_prefix}
  −
 
  −
where {output_prefix} is a prefix to the name of the Makefiles that will be generated by UMAKE.
      
An additional option can be added in the configuration file:
 
An additional option can be added in the configuration file:
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