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==Analyzing a Sample==
 
==Analyzing a Sample==
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Using umake, you can analyze the BAM files generated in the previous step and generate a VCF file.  Once again, we can analyze BAM files used in the automatic test.  You will need three files for this: index, configuration, and bed.
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Using UMAKE, you can analyze the BAM files generated in the previous step and generate a VCF file.  Once again, we can analyze BAM files used in the automatic test.  You will need three files for this: index, configuration, and bed.
     
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