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* Index file - See the example index file already prepared for this project
 
* Index file - See the example index file already prepared for this project
   −
cat $S5/examples/index/chr7.CFTR.fastq.index
+
cat $S5/examples/index/chr7.CFTR.fastq.index
    
* Configuration File - See the example configuration file below.
 
* Configuration File - See the example configuration file below.
  % cat $S5/examples/index/chr7.CFTR.align.conf
+
  cat $S5/examples/index/chr7.CFTR.align.conf
 
+
 
  INDEX_FILE = index/chr7.CFTR.fastq.index
 
  INDEX_FILE = index/chr7.CFTR.fastq.index
 
  ###################
 
  ###################

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