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===error: zlib.h: No such file or directory===
make: *** [samtools] Error 2
make: *** [../../libStatGen/libStatGen. a] Error 2
If you are using version 0.4.4 and under, please go to our wiki page to download the newest version [[
[RAREMETAL ]]]. There was a bug in makefile in older versions of RAREMETAL that could cause this error and it has been fixed. For a quick fix, please go to /raremetal/src and open "Makefile". Then comment out the lines at the bottom of raremetal/src/Makefile that set LD_LIBRARY_PATH. Try compiling and see if it works .
This problem has been solved. If you are using version 0.4.5 or older, please download the newest version
[[[RAREMETALWORKER ]]], and then in your command line, add --noeof. If you still see the error message, then you need to check if your bgzip has been updated to current version.
===recommended strategies for debugging===