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  1. RAREMETAL Documentation‏‎ (444 revisions)
  2. RAREMETALWORKER‏‎ (429 revisions)
  3. Vt‏‎ (422 revisions)
  4. TrioCaller‏‎ (211 revisions)
  5. Minimac‏‎ (200 revisions)
  6. Variant Normalization‏‎ (192 revisions)
  7. Abecasis Lab‏‎ (191 revisions)
  8. Biostatistics 615/815 Fall 2011‏‎ (176 revisions)
  9. LocusZoom Standalone‏‎ (162 revisions)
  10. EPACTS for DIAGRAM‏‎ (158 revisions)
  11. RAREMETAL DOWNLOAD & BUILD‏‎ (152 revisions)
  12. RareMETALS‏‎ (147 revisions)
  13. Biostatistics 666: Main Page‏‎ (146 revisions)
  14. Tutorial: Low Pass Sequence Analysis‏‎ (145 revisions)
  15. RAREMETALWORKER METHOD‏‎ (142 revisions)
  16. Minimac3‏‎ (137 revisions)
  17. Tutorial: GotCloud‏‎ (125 revisions)
  18. Polymutt‏‎ (124 revisions)
  19. RAREMETAL METHOD‏‎ (123 revisions)
  20. Famrvtest‏‎ (122 revisions)
  21. Minimac: 1000 Genomes Imputation Cookbook‏‎ (118 revisions)
  22. EPACTS‏‎ (117 revisions)
  23. Main Page‏‎ (117 revisions)
  24. MaCH‏‎ (114 revisions)
  25. BamUtil‏‎ (111 revisions)
  26. SeqShop: Sequence Mapping and Assembly Practical, June 2014‏‎ (106 revisions)
  27. Relationship between Ploidy, Alleles and Genotypes‏‎ (103 revisions)
  28. Variant classification‏‎ (103 revisions)
  29. QPLOT‏‎ (102 revisions)
  30. GotCloud‏‎ (101 revisions)
  31. EMADS‏‎ (97 revisions)
  32. Tutorial: RAREMETAL‏‎ (95 revisions)
  33. EMADS Primary Analysis Plan‏‎ (92 revisions)
  34. GotCloud: Binary Releases‏‎ (82 revisions)
  35. VcfCodingSnps‏‎ (82 revisions)
  36. SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014‏‎ (81 revisions)
  37. Software‏‎ (81 revisions)
  38. DosageConvertor‏‎ (80 revisions)
  39. VerifyBamID‏‎ (73 revisions)
  40. GotCloud: Variant Calling Pipeline‏‎ (72 revisions)
  41. GREGOR‏‎ (72 revisions)
  42. Biostatistics 602: Main Page‏‎ (71 revisions)
  43. LibStatGen: BAM‏‎ (70 revisions)
  44. SeqShop: Calling Your Own Genome, December 2014‏‎ (69 revisions)
  45. Triodenovo‏‎ (67 revisions)
  46. Exome Chip Design‏‎ (66 revisions)
  47. LocusZoom‏‎ (63 revisions)
  48. Biostatistics 615/815: Main Page‏‎ (63 revisions)
  49. Biostatistics 830: Main Page‏‎ (62 revisions)
  50. SeqShop: Estimates of Genetic Ancestry Practical, June 2014‏‎ (61 revisions)
  51. SeqShop: Analysis of Structural Variation Practical, June 2014‏‎ (61 revisions)
  52. SardiNIA‏‎ (60 revisions)
  53. METAL Documentation‏‎ (59 revisions)
  54. RAREMETAL‏‎ (57 revisions)
  55. LASER‏‎ (57 revisions)
  56. FastQValidator‏‎ (56 revisions)
  57. SeqShop: Calling Your Own Genome, May 2015‏‎ (56 revisions)
  58. RareMETALS2‏‎ (55 revisions)
  59. GotCloud: Genetic Reference and Resource Files‏‎ (55 revisions)
  60. Arf‏‎ (53 revisions)
  61. LibStatGen: FASTQ‏‎ (52 revisions)
  62. Creating an AMI on EC2‏‎ (51 revisions)
  63. FTEC‏‎ (50 revisions)
  64. SeqShop: May 2015‏‎ (50 revisions)
  65. C++ Library: libStatGen‏‎ (50 revisions)
  66. MaCH FAQ‏‎ (49 revisions)
  67. GotCloud: Alignment Pipeline‏‎ (49 revisions)
  68. Minimac2‏‎ (47 revisions)
  69. Shuang Feng‏‎ (47 revisions)
  70. RAREMETAL Command Reference‏‎ (46 revisions)
  71. Sequencing Workshop Analysis of Indels‏‎ (46 revisions)
  72. LibStatGen Download‏‎ (44 revisions)
  73. Thunder‏‎ (43 revisions)
  74. RAREMETAL Change Log‏‎ (43 revisions)
  75. Karma-colorspace‏‎ (43 revisions)
  76. Test EPACTS for DIAGRAM‏‎ (43 revisions)
  77. StarCluster‏‎ (42 revisions)
  78. Minimac3 Usage‏‎ (42 revisions)
  79. BamGenotypeCheck‏‎ (42 revisions)
  80. Minimac4‏‎ (41 revisions)
  81. Amazon Snapshot‏‎ (40 revisions)
  82. SeqShop: Ancestry On Your Own Genome, December 2014‏‎ (40 revisions)
  83. C++ Class: SamFile‏‎ (40 revisions)
  84. METAL Quick Start‏‎ (39 revisions)
  85. UMAKE‏‎ (39 revisions)
  86. GotCloud: Alignment Sub-Pipelines‏‎ (38 revisions)
  87. Sequence Analysis Practice 2011/03/09‏‎ (38 revisions)
  88. Karma‏‎ (37 revisions)
  89. SeqShop: Analysis of Structural Variation Practical, December 2014‏‎ (37 revisions)
  90. SeqShop: Sequence Mapping and Assembly Practical, December 2014‏‎ (36 revisions)
  91. SeqShop: Variant Calling and Filtering for INDELs Practical, June 2014‏‎ (35 revisions)
  92. Vmatch‏‎ (35 revisions)
  93. RAREMETALWORKER command reference‏‎ (34 revisions)
  94. SeqShop: Estimates of Genetic Ancestry Practical, December 2014‏‎ (34 revisions)
  95. SeqShop: December 2014‏‎ (34 revisions)
  96. BamUtil: dedup‏‎ (34 revisions)
  97. Analyses of Indels‏‎ (34 revisions)
  98. Make file tutorial‏‎ (33 revisions)
  99. SEQMIX‏‎ (33 revisions)
  100. Biostatistics 866: Main Page‏‎ (33 revisions)
  101. Minimac3 Info File‏‎ (33 revisions)
  102. SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014‏‎ (33 revisions)
  103. RAREMETALWORKER SPECIAL TOPICS‏‎ (33 revisions)
  104. SAM Validation Criteria‏‎ (33 revisions)
  105. Minimac3 Imputation Cookbook‏‎ (33 revisions)
  106. Releasing GotCloud‏‎ (32 revisions)
  107. GTDT‏‎ (32 revisions)
  108. Abecasis Group Awards‏‎ (31 revisions)
  109. SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014‏‎ (31 revisions)
  110. RAREMETAL FAQ‏‎ (31 revisions)
  111. Biostatistics 830 - Code Snippets‏‎ (30 revisions)
  112. RAREFY COMMAND‏‎ (30 revisions)
  113. Polymutt2‏‎ (30 revisions)
  114. BamUtil: recab‏‎ (30 revisions)
  115. CSG Tech Talks‏‎ (29 revisions)
  116. C++ Class: CigarRoller‏‎ (29 revisions)
  117. RAREFY DOCUMENTATION‏‎ (29 revisions)
  118. IMPUTE2: 1000 Genomes Imputation Cookbook‏‎ (29 revisions)
  119. ExomePicks‏‎ (28 revisions)
  120. BamUtil: validate‏‎ (28 revisions)
  121. Raremetal Incoming updates‏‎ (28 revisions)
  122. BamUtil: convert‏‎ (27 revisions)
  123. BAM Review Action Items‏‎ (27 revisions)
  124. Minimac3 ChangeLog‏‎ (27 revisions)
  125. SAM‏‎ (27 revisions)
  126. BamUtil: stats‏‎ (26 revisions)
  127. GotCloud: Amazon Demo‏‎ (26 revisions)
  128. SeqShop: Genetic Association Analysis Practical, June 2014‏‎ (26 revisions)
  129. BamUtil: bam2FastQ‏‎ (26 revisions)
  130. BamUtil: clipOverlap‏‎ (25 revisions)
  131. SeqShop: June 2014‏‎ (25 revisions)
  132. M3vcftools Usage‏‎ (25 revisions)
  133. Using Git Example‏‎ (25 revisions)
  134. GotCloud: Versions‏‎ (24 revisions)
  135. EMMAX‏‎ (23 revisions)
  136. MutationFilter‏‎ (23 revisions)
  137. SeqShop: Genetic Association Analysis Practical, December 2014‏‎ (22 revisions)
  138. BamUtil: trimBam‏‎ (22 revisions)
  139. Bar Harbor Statistical Genetics Workshop‏‎ (22 revisions)
  140. Generic Exome Analysis Plan‏‎ (22 revisions)
  141. Minimac: Tutorial‏‎ (22 revisions)
  142. Introduction to new students‏‎ (21 revisions)
  143. C++ Class: SamFileHeader‏‎ (20 revisions)
  144. C++ Library: general Change Log‏‎ (20 revisions)
  145. Tutorial: GotCloud UW CMG‏‎ (20 revisions)
  146. SeqShop: Ancestry On Your Own Genome, June 2014‏‎ (20 revisions)
  147. C++ Class: SamRecord‏‎ (20 revisions)
  148. Creating a Snapshot on EC2‏‎ (20 revisions)
  149. Amazon Storage‏‎ (20 revisions)
  150. SeqShop: Analysis of Structural Variation Practical, May 2015‏‎ (20 revisions)
  151. Tutorial: EMMAX GotCloud STOM‏‎ (19 revisions)
  152. RvTests‏‎ (19 revisions)
  153. SeqShop: Aligning Your Own Genome, December 2014‏‎ (19 revisions)
  154. Tandem Repeat Concepts‏‎ (19 revisions)
  155. VICES‏‎ (19 revisions)
  156. GotCloud: Source Releases‏‎ (19 revisions)
  157. Tutorial: Low Pass Sequence Analysis Answers‏‎ (19 revisions)
  158. GlfSingle‏‎ (19 revisions)
  159. VcfCooker‏‎ (19 revisions)
  160. Bam read count‏‎ (18 revisions)
  161. GotCloud: FAQs‏‎ (18 revisions)
  162. SeqShop: Ancestry On Your Own Genome, May 2015‏‎ (18 revisions)
  163. BamUtil: filter‏‎ (17 revisions)
  164. C++ Class: InputFile‏‎ (17 revisions)
  165. SeqShop: Sequence Mapping and Assembly Practical, May 2015‏‎ (17 revisions)
  166. LibStatGen Repository‏‎ (17 revisions)
  167. Evaluating a Read Mapper on Simulated Data‏‎ (17 revisions)
  168. GlfTrio‏‎ (17 revisions)
  169. Minimac3 Info (Older Version)‏‎ (17 revisions)
  170. FamLDCaller‏‎ (17 revisions)
  171. RAREFY‏‎ (17 revisions)
  172. LibStatGen: general‏‎ (17 revisions)
  173. MEAGA‏‎ (17 revisions)
  174. GotCloud: Variant Calling Options‏‎ (17 revisions)
  175. Minimac Command Reference‏‎ (17 revisions)
  176. ChunkChromosome‏‎ (16 revisions)
  177. SeqShop: Aligning Your Own Genome, June 2014‏‎ (16 revisions)
  178. LibStatGen: ASP‏‎ (16 revisions)
  179. VcfRefGen‏‎ (16 revisions)
  180. BamUtil: mergeBam‏‎ (15 revisions)
  181. METAL‏‎ (15 revisions)
  182. GlfMultiples‏‎ (15 revisions)
  183. SeqShop: Calling Your Own Genome, June 2014‏‎ (15 revisions)
  184. Short Workshops‏‎ (15 revisions)
  185. LibStatGen: VCF‏‎ (15 revisions)
  186. C++ Library: FASTQ Change Log‏‎ (15 revisions)
  187. SardiNIA project meeting July 15-16, 2013‏‎ (14 revisions)
  188. How To Use Git‏‎ (14 revisions)
  189. M3vcftools‏‎ (13 revisions)
  190. Mach DAC‏‎ (13 revisions)
  191. Genezoom‏‎ (13 revisions)
  192. SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015‏‎ (13 revisions)
  193. Git FAQs‏‎ (13 revisions)
  194. GotCloud: GenomeSTRiP Pipeline‏‎ (13 revisions)
  195. METAL Command Reference‏‎ (13 revisions)
  196. MaCH: machX‏‎ (13 revisions)
  197. CalcMatch‏‎ (13 revisions)
  198. Minimac3 Cookbook : Chromosome X Imputation‏‎ (13 revisions)
  199. GotCloud: Creating a New Pipeline‏‎ (12 revisions)
  200. Minimac3 Examples‏‎ (12 revisions)
  201. RAREFY DOWNLOAD‏‎ (12 revisions)
  202. RelativeFinder‏‎ (12 revisions)
  203. MaCH: Input Files‏‎ (12 revisions)
  204. SAM/BAM Classes FAQs‏‎ (12 revisions)
  205. LiftOver‏‎ (12 revisions)
  206. Base Caller Summaries‏‎ (12 revisions)
  207. BamUtil: writeRegion‏‎ (12 revisions)
  208. GLF‏‎ (12 revisions)
  209. Tutorial: EMMAX GotCloud STOM: Lecture 8‏‎ (11 revisions)
  210. Verifying Sample Identities - Implementation‏‎ (11 revisions)
  211. SAV File Format‏‎ (11 revisions)
  212. BamUtil: diff‏‎ (11 revisions)
  213. MaCH: 1000 Genomes Imputation Cookbook‏‎ (11 revisions)
  214. SeqShop: Variant Calling and Filtering for INDELs Practical, May 2015‏‎ (11 revisions)
  215. LibStatGen Troubleshooting‏‎ (11 revisions)
  216. RAREFY TUTORIAL‏‎ (11 revisions)
  217. Class Notes‏‎ (11 revisions)
  218. Sean Caron‏‎ (11 revisions)
  219. UMAKE-glfSingle‏‎ (10 revisions)
  220. LibStatGen: GLF‏‎ (10 revisions)
  221. Trial Enrichment‏‎ (10 revisions)
  222. Amazon Single Node‏‎ (10 revisions)
  223. 1000 Genomes Project Pilot 1 SNP Calling‏‎ (10 revisions)
  224. Minimac4 - Full List of Options‏‎ (10 revisions)
  225. C++ Class: FastQFile‏‎ (10 revisions)
  226. Haploxt‏‎ (10 revisions)
  227. Sam Library Usage Examples‏‎ (10 revisions)
  228. Biostatistics 666: Linkage Disequilibrium‏‎ (10 revisions)
  229. BamUtil: polishBam‏‎ (10 revisions)
  230. BAFRegress‏‎ (9 revisions)
  231. GotCloud: Amazon‏‎ (9 revisions)
  232. Goncalo Abecasis‏‎ (9 revisions)
  233. Dajiang Liu‏‎ (9 revisions)
  234. Regions of high linkage disequilibrium (LD)‏‎ (9 revisions)
  235. ContaminationDetection‏‎ (9 revisions)
  236. Using Gotcloud on Flux‏‎ (9 revisions)
  237. New Fugue‏‎ (9 revisions)
  238. BamUtil: splitBam‏‎ (9 revisions)
  239. FamRvTest command‏‎ (9 revisions)
  240. Summary Statistics Files Specification for RAREMETAL and rvtests‏‎ (9 revisions)
  241. Rare variant tests‏‎ (9 revisions)
  242. BaseQualityCheck‏‎ (8 revisions)
  243. Minimac3 Cookbook : Converting Files to VCF‏‎ (8 revisions)
  244. Debuggers‏‎ (8 revisions)
  245. Bayesdenovo‏‎ (8 revisions)
  246. Biostatistics 666: Introductory Lecture‏‎ (8 revisions)
  247. METAL FAQ‏‎ (8 revisions)
  248. Biostatistics 501: Main Page‏‎ (8 revisions)
  249. Gzip‏‎ (8 revisions)
  250. Biostatistics 666: Modeling Recombination and Migration in the Coalescent‏‎ (8 revisions)
  251. Sayantan Das‏‎ (8 revisions)
  252. Examples of Read Mapping with Karma and BWA‏‎ (8 revisions)
  253. Idriver‏‎ (8 revisions)
  254. RAREMETALWORKER X‏‎ (7 revisions)
  255. Jennifer Bragg-Gresham‏‎ (7 revisions)
  256. Mount S3 Volume‏‎ (7 revisions)
  257. SplitPed‏‎ (7 revisions)
  258. SeqShop: Association Analysis, May 2015‏‎ (7 revisions)
  259. BamUtil: dumpAsp‏‎ (7 revisions)
  260. SAM/BAM Convert Sequence‏‎ (7 revisions)
  261. Minimac4 Documentation‏‎ (7 revisions)
  262. SeqShop: Friday - Practicing what we learned, June 2014‏‎ (7 revisions)
  263. PileupBasedVariantCalling‏‎ (7 revisions)
  264. Biostatistics 666: Hardy-Weinberg Equilibrium‏‎ (7 revisions)
  265. Better X Sessions from Home (NX)‏‎ (7 revisions)
  266. GotCloud: Configuration‏‎ (7 revisions)
  267. SeqShop: Aligning Your Own Genome, May 2015‏‎ (7 revisions)
  268. Biostatistics 666: Advanced Coalescent, Changing Population Size‏‎ (6 revisions)
  269. BAM‏‎ (6 revisions)
  270. Git Cheat Sheet‏‎ (6 revisions)
  271. Biostatistics 666: Maximum Likelihood Allele Frequency Estimation‏‎ (6 revisions)
  272. Minimac3 - Full List of Options‏‎ (6 revisions)
  273. GotCloud: RedHat Package‏‎ (6 revisions)
  274. GotCloud: Filters‏‎ (6 revisions)
  275. Scott Vrieze‏‎ (6 revisions)
  276. SeqShop: Estimates of Genetic Ancestry Practical, May 2015‏‎ (6 revisions)
  277. BamUtil: squeeze‏‎ (6 revisions)
  278. Tutorial: EMMAX GotCloud STOM: Lecture 5‏‎ (6 revisions)
  279. Garlic‏‎ (6 revisions)
  280. SNP Call Set Properties‏‎ (6 revisions)
  281. Minimac3 Cookbook : Pre-Phasing‏‎ (6 revisions)
  282. Genotype Likelihood based Allele Frequency‏‎ (6 revisions)
  283. Code Sample: Generating QQ Plots in R‏‎ (6 revisions)
  284. An example of using libcsg‏‎ (6 revisions)
  285. BamUtil: indelDiscordance‏‎ (6 revisions)
  286. Understanding vcf-summary output‏‎ (6 revisions)
  287. Computer How-Tos‏‎ (6 revisions)
  288. FastQ Validation Criteria‏‎ (6 revisions)
  289. Genotype Likelihood Based Allele Balance‏‎ (6 revisions)
  290. Configure GotCloud‏‎ (5 revisions)
  291. Installing MinGW & MSYS on Windows‏‎ (5 revisions)
  292. NHLBI Informatics Resource‏‎ (5 revisions)
  293. Understanding VerifyBamID output‏‎ (5 revisions)
  294. Fst‏‎ (5 revisions)
  295. Biostatistics 666: Introduction to De Novo Assembly‏‎ (5 revisions)
  296. Meta Analysis of SNPxEnvironment Interaction‏‎ (5 revisions)
  297. BamUtil: asp‏‎ (5 revisions)
  298. BamPileup‏‎ (5 revisions)
  299. Biostatistics 666: Modeling Variation in the Coalescent‏‎ (5 revisions)
  300. M3VCF Files‏‎ (5 revisions)
  301. StatgenTools‏‎ (5 revisions)
  302. Mapping Quality Scores‏‎ (5 revisions)
  303. Vpeep‏‎ (5 revisions)
  304. BamUtil: FAQ‏‎ (5 revisions)
  305. Read Mapping‏‎ (5 revisions)
  306. Biostatistics 666: Haplotype Association Tests‏‎ (5 revisions)
  307. Mach2dat: Association with MACH output‏‎ (5 revisions)
  308. Rvtests‏‎ (5 revisions)
  309. PedScript‏‎ (5 revisions)
  310. BamUtil: gapInfo‏‎ (5 revisions)
  311. Basic Linux Intro‏‎ (4 revisions)
  312. Ben Lerch‏‎ (4 revisions)
  313. BamUtil: dumpHeader‏‎ (4 revisions)
  314. AWS Resources‏‎ (4 revisions)
  315. Biostatistics 666: Introduction to the E-M Algorithm‏‎ (4 revisions)
  316. SAV Command Line Interface‏‎ (4 revisions)
  317. RAREFY FAQ‏‎ (4 revisions)
  318. Biostatistics 666: Haplotype Estimation‏‎ (4 revisions)
  319. Genotype Likelihood based Inbreeding Coefficient‏‎ (4 revisions)
  320. Tutorial: EMMAX GotCloud STOM: Lecture 6‏‎ (4 revisions)
  321. Variant Call Pipeline‏‎ (4 revisions)
  322. 830 - Haplotyper::SampleHaplotypes()‏‎ (4 revisions)
  323. BamUtil: revert‏‎ (4 revisions)
  324. StatsTools‏‎ (4 revisions)
  325. 830 - Haplotyper::ScoreLeftConditional()‏‎ (4 revisions)
  326. Links to Sequence Analysis Tools‏‎ (4 revisions)
  327. 830 - MINIMAC::main()‏‎ (4 revisions)
  328. Biostatistics 666: Introduction to the Coalescent‏‎ (4 revisions)
  329. TabAnno‏‎ (4 revisions)
  330. CheckVCF.py‏‎ (4 revisions)
  331. Biostatistics 666: Whole Genome Sequencing‏‎ (4 revisions)
  332. Biostatistics 666: Advanced Coalescent, Computation with the Coalescent‏‎ (4 revisions)
  333. C++ Class: Pedigree Example‏‎ (4 revisions)
  334. Alan Kwong‏‎ (4 revisions)
  335. Power Calculations: Quantitative Traits‏‎ (4 revisions)
  336. 830 - Haplotyper::SampleOneHaplotype()‏‎ (4 revisions)
  337. Tramp‏‎ (4 revisions)
  338. VerifyIDintensity‏‎ (4 revisions)
  339. CigarRoller Proposed Update‏‎ (4 revisions)
  340. Biostatistics 666: Linkage Tests for Pairs of Individuals‏‎ (4 revisions)
  341. BamUtil: splitChromosome‏‎ (4 revisions)
  342. Pileup‏‎ (4 revisions)
  343. TrioCaller:Archive‏‎ (4 revisions)
  344. Biostatistics 666: Linkage Analysis in Sibling Pairs‏‎ (4 revisions)
  345. Minimac Diagnostics‏‎ (4 revisions)
  346. Savvy C++ Library‏‎ (4 revisions)
  347. Biostatistics 666: Course Introduction and Hardy Weinberg Equilibrium‏‎ (4 revisions)
  348. Samtools-hybrid‏‎ (4 revisions)
  349. 830 - Haplotyper::RandomSetup()‏‎ (3 revisions)
  350. GBR60vc.conf‏‎ (3 revisions)
  351. BamUtil: findCigars‏‎ (3 revisions)
  352. CHARGE‏‎ (3 revisions)
  353. Screen Commands‏‎ (3 revisions)
  354. Lars Fritsche‏‎ (3 revisions)
  355. Ligate Minimac‏‎ (3 revisions)
  356. TOPMed Site Visit 2018‏‎ (3 revisions)
  357. BAM to FASTQ‏‎ (3 revisions)
  358. Xiaowei Zhan‏‎ (3 revisions)
  359. Rare Variant Analysis and Meta-Analysis‏‎ (3 revisions)
  360. Biostatistics 666: Association Tests in Structured Populations‏‎ (3 revisions)
  361. MappabilityScores‏‎ (3 revisions)
  362. METAL CUSTOMVARIABLE‏‎ (3 revisions)
  363. Biostatistics 666: Power of Genomewide Association Studies‏‎ (3 revisions)
  364. Code Sample: Generating Manhattan Plots in R‏‎ (3 revisions)
  365. FASTA‏‎ (3 revisions)
  366. Ann Arbor Travel Basics‏‎ (3 revisions)
  367. 830 - Haplotyper::ImputeGenotypes() (internal)‏‎ (3 revisions)
  368. Biostatistics 666: Variance Component Analyses‏‎ (3 revisions)
  369. TinySimulator‏‎ (3 revisions)
  370. GWAS‏‎ (3 revisions)
  371. BamUtil: dumpIndex‏‎ (3 revisions)
  372. Kyoto Encyclopedia of Genes and Genomes‏‎ (3 revisions)
  373. Sara Rashkin‏‎ (3 revisions)
  374. Biostatistics 666: Applications of the Lander-Green Algorithm‏‎ (3 revisions)
  375. 830 - Haplotyper::SummarizeOptions()‏‎ (3 revisions)
  376. BamUtil: dumpRefInfo‏‎ (3 revisions)
  377. Understanding QPLOT output‏‎ (3 revisions)
  378. 830 - Haplotyper::ImputeGenotypes()‏‎ (3 revisions)
  379. Zlib‏‎ (3 revisions)
  380. 830 - MarkovModel::Condition()‏‎ (2 revisions)
  381. Biostatistics 666: Analysis of Copy Number Using Sequence Data‏‎ (2 revisions)
  382. Example‏‎ (2 revisions)
  383. 830 - MaqIndex::CompareToIndex()‏‎ (2 revisions)
  384. Mary Kate Wing‏‎ (2 revisions)
  385. MaCH Options‏‎ (2 revisions)
  386. NHLBI Exome Sequencing Project‏‎ (2 revisions)
  387. Makefile.tool‏‎ (2 revisions)
  388. GotCloud: Reference Files‏‎ (2 revisions)
  389. Tom Blackwell‏‎ (2 revisions)
  390. Gene Ontology‏‎ (2 revisions)
  391. Goncalo Abecasis: Interview with Christiana Fogg‏‎ (2 revisions)
  392. Mantra.cpp‏‎ (2 revisions)
  393. SAM: Filtering Reads‏‎ (2 revisions)
  394. StringMap.h‏‎ (2 revisions)
  395. Biostatistics 666: Rare Variant Burden Tests‏‎ (2 revisions)
  396. MaCH: Pedigree with Integer Allele Codes‏‎ (2 revisions)
  397. LiftRsNumber.py‏‎ (2 revisions)
  398. 830 - MarkovModel::Transpose()‏‎ (2 revisions)
  399. 830 - Haplotyper::ScoreLeftConditional() (smart, complicated)‏‎ (2 revisions)
  400. RareSimu‏‎ (2 revisions)
  401. 830 - BestAlignment::MaqAlignment()‏‎ (2 revisions)
  402. METAL GENOMICCONTROL‏‎ (2 revisions)
  403. Editing Sequence Analysis Practice 2011/03/10‏‎ (2 revisions)
  404. GlfMerge‏‎ (2 revisions)
  405. LiftMap.py‏‎ (2 revisions)
  406. 830 - MarkovModel::WalkLeft()‏‎ (2 revisions)
  407. Biostatistics 666: Contemporary Human Genetics‏‎ (2 revisions)
  408. Polymutt beta‏‎ (2 revisions)
  409. Biostatistics 666: Core Competencies‏‎ (2 revisions)
  410. 830 - BestAlignment::ClearPositions()‏‎ (2 revisions)
  411. Biostatistics 815 Term Project‏‎ (2 revisions)
  412. Parameters.h‏‎ (2 revisions)
  413. Stouffer Method for Meta-Analysis‏‎ (2 revisions)
  414. IMPUTE2‏‎ (2 revisions)
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