Difference between revisions of "Tandem Repeat Concepts"

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== Algorithm for Detection ==
 
== Algorithm for Detection ==
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== Detection of a motif in a sequence ==
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== Model free left alignment and right alignment ==
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== Model based fuzzy left alignment and right alignment ==
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== Model free fuzzy left alignment and right alignment ==
  
 
= Implementation =
 
= Implementation =

Revision as of 20:32, 12 February 2016

Introduction

This page is about Tandem Repeats.

Definition

A series of repeats that are contiguous

Classification

  • motif length
  • motif basis
  • repeat tract lengfth
  • purity

Algorithm for Detection

Detection of a motif in a sequence

Model free left alignment and right alignment

Model based fuzzy left alignment and right alignment

Model free fuzzy left alignment and right alignment

Implementation

This is implemented in vt.

Citation

Maintained by

This page is maintained by Adrian.