Difference between revisions of "Triodenovo"
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| + | == Introduction == | ||
| + | * The program '''triodenovo''' implemented a Bayesian framework for calling '''''de novo''''' mutations in """trios""" for next-generation sequencing data. | ||
| + | * It takes as input a standard VCF file with PL or GL fields (storing genotype likelihoods). Commonly used callers, e.g. GATK and samtools, generate VCF files with PL values. | ||
| + | |||
| + | == Download == | ||
Source code of v0.04 [[Media:triodenovo.0.04.tar.gz | download]] here. Pre-compiled binary version of 0.02 [[Media:triodenovo.0.02.binary.tar.gz | download]] here. | Source code of v0.04 [[Media:triodenovo.0.04.tar.gz | download]] here. Pre-compiled binary version of 0.02 [[Media:triodenovo.0.02.binary.tar.gz | download]] here. | ||
Revision as of 23:10, 2 April 2014
Introduction
- The program triodenovo implemented a Bayesian framework for calling de novo mutations in """trios""" for next-generation sequencing data.
- It takes as input a standard VCF file with PL or GL fields (storing genotype likelihoods). Commonly used callers, e.g. GATK and samtools, generate VCF files with PL values.
Download
Source code of v0.04 download here. Pre-compiled binary version of 0.02 download here.
