Triodenovo

Introduction

• The program triodenovo implemented a Bayesian framework for calling de novo mutations in """trios""" for next-generation sequencing data.
• It takes as input a standard VCF file with PL or GL fields (storing genotype likelihoods). Commonly used callers, e.g. GATK and samtools, generate VCF files with PL values.

Download

Source code of v0.04 download here. Pre-compiled binary version of 0.02 download here.