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* Configuration File - See the example configuration file below.
 
* Configuration File - See the example configuration file below.
 
  cat $S5/examples/index/chr7.CFTR.align.conf
 
  cat $S5/examples/index/chr7.CFTR.align.conf
 
+
 
  INDEX_FILE = index/chr7.CFTR.fastq.index
 
  INDEX_FILE = index/chr7.CFTR.fastq.index
 
  ###################
 
  ###################

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