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155 bytes added ,  10:04, 12 July 2011
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* If SNP site is already defined, instead of --snpcall option, you can extract the genotype likelihood using the following command
 
* If SNP site is already defined, instead of --snpcall option, you can extract the genotype likelihood using the following command
 
  perl $(UMAKE_HOME)/scripts/umake.pl --extract
 
  perl $(UMAKE_HOME)/scripts/umake.pl --extract
   
+
* If using MOSIX nodes, change default MOSIX_PREFIX as following:
 +
  MOS_PREFIX = mosrun -E/tmp -t -i -m 2000    # PREFIX FOR MOSIX COMMAND (BLANK IF UNUSED)
 +
 
 
== Preparing Your Own Input Files ==
 
== Preparing Your Own Input Files ==
  
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